Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1086 ATGGCAGGAGGAGGAGCTGCACCACAACCCAAGCAAGATGAGCATCAACCACATCCAGTGAAAGATCAATTACCAAATGTTTCTTTCTGCATTACAAGTCCTCCTCCTTGGCCGGAGGCGATCCTACTTGGTTTCCAACATTACCTGGTGATGCTTGGCACAACTGTTCTAATTCCCAGCTCTCTTGTTCCCCAGATGGGAGGAGGAAATGAAGAGAAAGCAAAAGTGATTCAGACTCTACTGTTTGTGGCTGGCATAAACACATTTTTCCAAACATTCTTTGGGACTCGTTTGCCTGCAGTTATTGGGGGATCCTACACCTTTGTGCCAACAACCATTTCAATCATTCTGGCTGGTCGCTACAGTGATGTTGTGAATCCTCAGGAGAAATTTGAGAGGATAATGCGTGGAACACAGGGTGCCCTTATTGTTGCCTCAACCCTCCAAATTGTTCTTGGCTTCAGTGGCCTTTGGCGCAATGTAGTGAGGTTCTTAAGTCCTCTCTCTGCTGTTCCCTTAGTTGCTCTGTCAGGCTTTGGGCTATATGAACTTGGTTTTCCTGTGCTTGCAAAATGTGTCGAGATTGGACTGCCAGAAATCATCATCCTAGTAGTATTTTCACAGTACATTCCTCATATGATGAAAGGAGAAAGGCCAATCTTTGATCGCTTTGCGGTTATATTCTCAGTAGCAATTGTGTGGATTTATGCTCATCTTCTTACAGTTGGTGGAGCTTACAGAAATTCAGCACCTAAAACCCAAATTACTTGCAGAACTGATCGTGCTGGAATTATAGGGGGTGCACCTTGGATAAGAATCCCTTATCCTTTTCAATGGGGAGCTCCTACATTTGAAGCTGGAGAAGCTTTCGCTATGATGGCAGCTTCATTTGTTGCTCTAGTAGAGTCAACTGGTGCTTTCATTGCTGTGTCAAGGTATGCAAGTGCAACACCTATTCCACCTTCAGTTCTTAGCCGTGGTGTTGGTTGGCAGGGAGTGGGAGTTTTGTTGTCAGGGATATTTGGAACAGGGAATGGATCATCAGTTTCTGTAGAGAACGCAGGACTATTAGCTTTAACACGTGTGGGAAGTAGAAGAGTTGTTCAAATATCAGCTGGATTCATGATCTTTTTTTCAATTCTTGGAAAATTTGGAGCTGTTTTTGCTTCAATTCCAGCTCCAATAGTTGCAGCTTTATATTGTCTTTTCTTTGCCTATGTAGGTTCAGCAGGTCTCAGTTTCCTTCAGTTTTGCAATTTAAACAGCTTCAGAACTAAATTCATCTTAGGCTTCTCTATTTTCATGGGCTTCTCCATACCACAATACTTCAATGAGTACACAGCATTTAAAGGCTACGGTCCTGTACACACACGAGCCAGATGGTTCAATGACATGATCAATGTGCCATTTCAATCTGAAGCATTTGTTGCTGGTATGTTGGCACTTCTCTTGGACGTTACGTTGCGCAAGAAAGACAACCAAACCCGGAAAGATAGAGGCATGCATTGGTGGGACAGATTTCGTTCATTCAAGACAGATACCAGGAGTGAAGAGTTTTACTCTCTACCTTTTAATCTAAACAAGTTTTTCCCTTCTGTGTGA 1602 0.432 MAGGGAAPQPKQDEHQPHPVKDQLPNVSFCITSPPPWPEAILLGFQHYLVMLGTTVLIPSSLVPQMGGGNEEKAKVIQTLLFVAGINTFFQTFFGTRLPAVIGGSYTFVPTTISIILAGRYSDVVNPQEKFERIMRGTQGALIVASTLQIVLGFSGLWRNVVRFLSPLSAVPLVALSGFGLYELGFPVLAKCVEIGLPEIIILVVFSQYIPHMMKGERPIFDRFAVIFSVAIVWIYAHLLTVGGAYRNSAPKTQITCRTDRAGIIGGAPWIRIPYPFQWGAPTFEAGEAFAMMAASFVALVESTGAFIAVSRYASATPIPPSVLSRGVGWQGVGVLLSGIFGTGNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIVAALYCLFFAYVGSAGLSFLQFCNLNSFRTKFILGFSIFMGFSIPQYFNEYTAFKGYGPVHTRARWFNDMINVPFQSEAFVAGMLALLLDVTLRKKDNQTRKDRGMHWWDRFRSFKTDTRSEEFYSLPFNLNKFFPSV* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1086 533 Pfam Permease family 39 443 IPR006043 GO:0016020|GO:0022857|GO:0055085
Gso18g1086 533 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 1 533 - -
Gso18g1086 533 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 1 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1086 Gso-Chr18 19051307 19055943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1086 7 533 Organic Solute Cotransporters AT1G60030 81.784 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1086 - - gmx:100776272 1061.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0305 1 3645475 3650173 Gso18g1086 18 19051307 19055943 PCT
Gso2g0257 2 2792860 2797762 Gso18g1086 18 19051307 19055943 PCT
Gso18g1086 18 19051307 19055943 Gso1g0305 1 3645475 3650173 PCT
Gso18g1086 18 19051307 19055943 Gso2g0257 2 2792860 2797762 PCT