Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0825 ATGAAGCACCCAAAACTCCAAACCCAATCAACCCCAACCCCATCACCCTCTTCAAGATCTTCTTCTCTCTCATCCCACCTTGCTATGGTGGAGCTGAAGCAGAAGATCCTAACTTCTCTGTCGAAGCTCTCCGACCGCGACACGCACCAGATCGCGGTGGAGGACTTGGAGAAGACCATCTCGGGGCTCTCGCCGGACGCCATTCCGATGATTCTCAATTGTCTCTACGACGCCGCCACCGACCCCAAGCCCGCCGTCAAGCGGGACGCCCTGCGCCTCCTCGCCGCCGTCTGCGGCGCGCACTCCGACGCCGCGGCCGCCCACCTTACCAAGATCATCGCCCACGTCGTCCGCCGCCTCAAGGACGCCGACTCCGCCGTCCGCGACGCCTGCCGTGACACCGTGGGCGCCCTCGCCGCGCAGTATTTGAAGGGAGACGGCGGCGGTGGTGGCGGTGGAGTCGGGACGGTGGTGGGGCTGTTCGTGAAGCCGCTTTTCGAGGCGATGGGGGAGCAGAACAAGGGGGTGCAGGCGGGGGCGGCGGTGTGCATGGCCAAGATGGTAGAGTGTGCCGGTGGCAGCGGAGGGGAGGCGGTGCCGGTTGCGGCGTTCCAGAAGCTATGTCCGAGGATCTACAAGCTGCTCAACAGTCCCAATTTCATGGCCAAGGCGGCGATTTTGCCGGTGGTTGCCAGCTTGTCCCAGATAAAACCTGTAAGAGATAGCATCAATGAAGCATTGCAACTGTGGAAAAAGATTGCAGGGAAAGGAGATGGGTCTCCTGATGATTCAAAGCCCTCATCTGATGGTGGGAATGAATCAGCTATTTCGTCAGAAGCAAGTGACCCGAAAAAAGTAAATCTTGATGAGAGGAAGACTGATTCACCAGTAAAGGGTTCATCAACTAGTTCTTCAAATATGGATTCAACTAAGGCCAAAGCAGCTAGCATCTCAGAGAAGGCAGTTGTGATACTGAAAAAGAAACCACCTGTGTTATCTGATAAAGAACTAAATCCAGAATTTTTCCAAAAACTTGAAAGAAGGGGTTCAGATGATTTACCAGTGGAAGTAGTTGTTCCTCGTAGAGGCCTCAATTCTTCTAACTCCAACAATGAGGAAGAATCAGAGGCAAATGCTAAAGATTCAAAAGAAAGAATAAATTCTGTTGGAAACATCCCTAATGATGATCATGGATCCTCCAGTAATAAATATCGTATCTTTGAGAGAGGCAATGATGGAAATTCCAAACAAAGGAATTATGATGATTTTGGCCATGACAGATTCTCTGAAAGGAGAGTGAACACAAAAGAACTGAGGACAAAAGCTTATGATACTGATGGCAGGACTGAAAATGATCAGAGGGACGGTTCTGCCAATGCTGCAGGTTTTTCTAAAACTGATGGTCAATCAGAAGTACCCTTCTCCAATAACAGAGCAAACTGGTTGGCCATCCAGAGGCAGTTGTTGCAACTGGAAAGGCAACAAGTTCATCTGATGAATATGCTGCAGGATTTCATGGGTGGATCTCATGATAGCATGGTGACTCTAGAGAACAGAGTGCGAGGTCTTGAGAGAATTGTTGAAGACATGTCACGAGATTTATCCATATCATCAGGTCGTAGAAACTTTGCAGGGTTTGAAGGGTCATCTAATAGGCCTTCTAGCAAGTATAATGGTTTTAACGACTACTCCAGTTCCAAGTATGGTAGAGGCGGTGATGGACGCATCCCATTTGGCGAAAGATTTGCCCAATCTGATGGAAATTCTTTGGGAATGAGGGGAAGAGGGCCATCTTGGAGATCTGACATGTCTGAGGGGTGGGATCATTCTGGATATGGTGCTTCTAGAAATGGCCAGATGTCCTCAAGGAGGGCTTTTGGGGGTAGTTCTGCTGATGGAAGATCACCAAAATCTGTGCATGAGAATGATCAAGCAGGCAACAGGAGAGCTTGGGATAAAGCAGCAATGCCCATCCGGCTTGGTGAGGGGCCCTCTGCAAGAAGTGTCTGGCAAGCTTCTAAGGATGAAGCTACCTTGGAAGCAATTCGGGTTGCTGGTGAGGACAATGGAACGTCTCGAGCAACAAGGGTAGCAATCCCTGAAATGACTGCTGAAGCTATGGCTGATGACAATGTTGGGCAAGAGAGGGATGCCATCTGGACTTCTTGGAGCAATGCAATGGATGCCCTTCAAGTAGGTGACCTAGATTCAGCCTTTGCAGAAGTATTGTCCGCTGGCGATGATATTTTGCTTGTAAAGCTAATGGATAAAACGGGCCCTGTAATTGACCAACTTTCAAGTGAAGTTGCATGTGAAACTGTAAATGCCATTGGACAATTCTTACTGGACCAGAACATGTATGACATTTGTTTGTCTTGGATTCAACAGTTGCTGGAGATAGTATTGGAAAATGGCCCTGATACCTTTGACATTCCCATGGAAGTAAAGAAAGAACTCTTGCTGAATTTACACGAAGCTTCTACAGATCCAGCTGAGACCTGGGAAGGGGTACAGCCAGATCAGCTTTTATTGCAATTGGCATCAGCCTGGGAAATTGATCTGCAACAGCATGACAAATAG 2580 0.4899 MKHPKLQTQSTPTPSPSSRSSSLSSHLAMVELKQKILTSLSKLSDRDTHQIAVEDLEKTISGLSPDAIPMILNCLYDAATDPKPAVKRDALRLLAAVCGAHSDAAAAHLTKIIAHVVRRLKDADSAVRDACRDTVGALAAQYLKGDGGGGGGGVGTVVGLFVKPLFEAMGEQNKGVQAGAAVCMAKMVECAGGSGGEAVPVAAFQKLCPRIYKLLNSPNFMAKAAILPVVASLSQIKPVRDSINEALQLWKKIAGKGDGSPDDSKPSSDGGNESAISSEASDPKKVNLDERKTDSPVKGSSTSSSNMDSTKAKAASISEKAVVILKKKPPVLSDKELNPEFFQKLERRGSDDLPVEVVVPRRGLNSSNSNNEEESEANAKDSKERINSVGNIPNDDHGSSSNKYRIFERGNDGNSKQRNYDDFGHDRFSERRVNTKELRTKAYDTDGRTENDQRDGSANAAGFSKTDGQSEVPFSNNRANWLAIQRQLLQLERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRRNFAGFEGSSNRPSSKYNGFNDYSSSKYGRGGDGRIPFGERFAQSDGNSLGMRGRGPSWRSDMSEGWDHSGYGASRNGQMSSRRAFGGSSADGRSPKSVHENDQAGNRRAWDKAAMPIRLGEGPSARSVWQASKDEATLEAIRVAGEDNGTSRATRVAIPEMTAEAMADDNVGQERDAIWTSWSNAMDALQVGDLDSAFAEVLSAGDDILLVKLMDKTGPVIDQLSSEVACETVNAIGQFLLDQNMYDICLSWIQQLLEIVLENGPDTFDIPMEVKKELLLNLHEASTDPAETWEGVQPDQLLLQLASAWEIDLQQHDK* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0825 859 MobiDBLite consensus disorder prediction 265 281 - -
Gso18g0825 859 MobiDBLite consensus disorder prediction 254 315 - -
Gso18g0825 859 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 235 859 IPR033337 GO:0005874|GO:0008017
Gso18g0825 859 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 17 235 IPR033337 GO:0005874|GO:0008017
Gso18g0825 859 MobiDBLite consensus disorder prediction 353 401 - -
Gso18g0825 859 Gene3D - 31 255 IPR011989 -
Gso18g0825 859 MobiDBLite consensus disorder prediction 384 401 - -
Gso18g0825 859 MobiDBLite consensus disorder prediction 439 453 - -
Gso18g0825 859 MobiDBLite consensus disorder prediction 297 313 - -
Gso18g0825 859 MobiDBLite consensus disorder prediction 581 652 - -
Gso18g0825 859 Coils Coil 513 533 - -
Gso18g0825 859 SUPERFAMILY ARM repeat 43 252 IPR016024 -
Gso18g0825 859 MobiDBLite consensus disorder prediction 1 24 - -
Gso18g0825 859 MobiDBLite consensus disorder prediction 614 628 - -
Gso18g0825 859 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 235 859 - -
Gso18g0825 859 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 17 235 - -
Gso18g0825 859 MobiDBLite consensus disorder prediction 454 472 - -
Gso18g0825 859 MobiDBLite consensus disorder prediction 439 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0825 Gso-Chr18 10623134 10634770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0825 - - gmx:100775602 1540.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0825 18 10623134 10634770 Gso8g2597 8 43588817 43595191 GST