Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0813 ATGAGAAGAAGGCCAGGAATTGGAGGTTTGCAGACGCATGCCGCTGCAAGGGATCAATTCCGTTTGCTGGGTGAAAATGTCGCAAAGATCAGAACCGATTTGATGAAGGAGCAGCTTGCCACCTTTCGCTCTCAGCTCGAAGATTTCGCTCGCAAACACAAGAATGACATCCGCAAGAACCCTGCATTCAGATCACAGTTTCATGAAATGTGTGCTAAAGTTGGAGTAGACCCCTTGGCCTCAAACAAGGGTTTCTGGTCAGAGCTGTTAGGACTTGGTGACTTCTATTATGAACTCGGAGTTCAGATTGTGGATATTTGCTTGGCTACTAGAGTCCACAATGGAGGACTGATCGACCTGCAGGAACTCTGCCATCTCCTTCGCCATAGACGAAAAACTGATCGTGAAGTTGTTTCTGAGGATGATTGCCTGCGTGCTATTAAGAAACTGAAGGTGCTGGGTAGTGGTTTTGAAGTTATTTCTGTTGGAAAGAAAAAACTTGTTCGTTCAGTTCCAACTGAGTTGAACAAAGACCACAATGAGATTCTAGAACTTGCCCAGGCTCAAGGATTTGTGACTGTCGATGAAGTAGAAAGGCGGTTATCTTGGAGTTCTGGCCGTGCCATCGATGCCCTTGATACATTACTTGATGAAGGACTTGCAATGATTGATGATGGCGATAAAGATGGCAGACGGCGGTACTGGTTTCCTTGTGTGTCTCCCATCTCGTCTTCTATCGGAGTTGATTCCTAA 753 0.4595 MRRRPGIGGLQTHAAARDQFRLLGENVAKIRTDLMKEQLATFRSQLEDFARKHKNDIRKNPAFRSQFHEMCAKVGVDPLASNKGFWSELLGLGDFYYELGVQIVDICLATRVHNGGLIDLQELCHLLRHRRKTDREVVSEDDCLRAIKKLKVLGSGFEVISVGKKKLVRSVPTELNKDHNEILELAQAQGFVTVDEVERRLSWSSGRAIDALDTLLDEGLAMIDDGDKDGRRRYWFPCVSPISSSIGVDS* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0813 250 Gene3D - 172 248 IPR036388 -
Gso18g0813 250 PIRSF ESCRT2_Vps22 1 245 IPR016689 GO:0000814|GO:0071985
Gso18g0813 250 SUPERFAMILY "Winged helix" DNA-binding domain 24 174 IPR036390 -
Gso18g0813 250 SUPERFAMILY "Winged helix" DNA-binding domain 175 238 IPR036390 -
Gso18g0813 250 Gene3D - 24 85 - -
Gso18g0813 250 PANTHER EAP30 SUBUNIT OF ELL COMPLEX 1 241 IPR016689 GO:0000814|GO:0071985
Gso18g0813 250 Gene3D - 91 171 IPR036388 -
Gso18g0813 250 Pfam EAP30/Vps36 family 6 225 IPR040608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0813 Gso-Chr18 10327285 10332702 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0813 K12188 - gmx:100796153 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0813 18 10327285 10332702 Gso8g2608 8 43725473 43730498 GST