Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0807 ATGAGTGTGGTGGGGTTTGACATTGGTAATGAGAACTGCGTCATTGCCGTAGTCAGGCAACGAGGCATTGATGTTTTGTTGAATTATGAATCTAAACGCGAAACCCCGGCTGTGGTCTGCTTTGGCGAGAAGCAGCGGATTTTGGGGTCTGCTGGTGCTGCTTCTGCTATGATGCACATCAAGTCCACAATATCTCAAATAAAGAGACTGATAGGAAGGAAGTTTGCGGATCCTGATGTGGAAAAAGAGCTGAAAATGCTCCCTGTTGAAACTTCTGAGGGTCAAGATGGAGGCATTTTGATTCATTTGAAGTACATGGGGGAGATTCATGTATTTACACCTGTTCAATTATTGTCCATGCTCTTTGCTCACTTGAAGACCATGACCGAGAAAGATTTGGAGATGCCCATTTCGGATTGTGTTATCGGGATCCCATCATACTTTACCGACTTGCAGAGACGGGCGTATCTTGATGCAGCGAAAATTGCCGGGTTGAAGCCTTTGAGATTGATCCATGATTGTACTGCAACTGCCCTTAGTTATGGAATGTATAAAAAAGATTTTGGAAGTGCAGGTCCTGTAAATGTTGCATTTATTGATATTGGTCACTGTGATACTCAGGTCTCAATTGCGTCATTTGAGTTTGGGAAAATGAAGATACTTTCACATGCGTTTGACAGGAGCTTAGGGGGGAGGGACTTTGATGAGGTTATATTTTGTCATTTTGCAGCAAAATTCAAGGAAGAGTACCACATTGACGTGTATTCTAATACCAAGGCATGCTTTAGGCTACGTGCAGCATGTGAGAAATTGAAGAAAGTTTTGAGTGCAAATCTAGAGGCGCCTCTAAATATCGAGTGTTTGATGGATGAGAAAGATGTCAAGGGATTTATCACAAGGGAAGAATTTGAGAAGCTGGCATCAGGATTACTGGAGAGAGTTTCTATTCCTTGCCGCAGAGCATTAATTGATGCAAACTTGACAGAAGAGAAGATTTCTTCTGTAGAGCTAGTTGGTTCGGGTTCTAGGATTCCAGCAATAAGTACATTACTAACTTCTCTGTTCAAGAGAGAACCCAGCCGACAGCTGAATGCAAGTGAGTGTGTAGCCCGTGGTTGTGCTCTACAGTGTGCAATGCTCAGTCCTATTTACCATGTGAGAGAATACGAGGTCAAGGATGTTATTCCCTTTTCAATTGGACTTTCATCAGATGAAGGTCCAGTTGCTGTGAGATCAAATGGTGTACTTTTCCCAAGAGGCCAACCCTTTCCAAGTGTTAAAGTCATAACCTTTCGGCGAAGTGATTTGTTTCATTTGGAAGCTTTCTATGCTAATCCAGATGAACTACCACCTGGGACATCTCCTATAATTAGTTGTGTCACGATTGGTCCTTTCCATGGATCCCACGGTAGTAAGATCAGAGTTAAAGTTAGAGTTCCACTTGATCTGCATGGCATTGTCAGTATTGAATCAGCTACATTGATCAAGGATGATTTGGTTATGGCTGGTGATTATCATTCAAATTCTGATGCAATGGATATTGATCCTATTTCTGAGACAGTTACCAATGGGTTTGAAGATAATACCAATAAGAACTTGGAATCTCCATGTAGTTCTGCTGATGGTACAAGAAAAGATAACAGAAGGCTTAATGTGCCAGTGAATGAGAATGTCTATGGTGGAATGACAAAGGCAGAGATCTTAGAAGCTCATGAAAAAGAACTCCAGTTGGCCCATCAGGACAGAATTGTAGAGCAAACCAAAGAAAAGAAGAACAGCTTGGAGTCTTATGTCTATGATATGAGGAGTAAGCTCTTCCACACATACCGAAGCTTTGCAAGTGAACAAGAGAAGGATGACATATCTAGGACCCTTCAAGAGACTGAGGAATGGCTTTATGAGGATGGTGTTGATGAAACTGAACATGCTTATTCTTCAAAACTGGAAGATCTGAAAAGGCTGGTAGATCCAATTGAGAATCGGTACAAAGATGATAAAGAAAGAGTGCAAGCTACAAGAGATTTATCGAAGTGCATTTTAAAGCATCGTGCTTCTGCAGATTCCCTTCCAACCCAGGATAAAGAACTGATCATCAATGAGTGCAATAAAGTTGAGCAGTGGTTGGAAGAGAAGATCCAGCAACAAGAATCATTTCCTAGAAATACTGATCCAATATTATGGTCAAGTGATATCAAGAGCAAGACAGAGGAGTTAAACTTAAAATGCCAACAGATATTGGGATCTAAGGCTTCTCCATCTCCAGAAGACAAAGACAAGCCGGATACATTCAATGATCCCTGA 2301 0.4146 MSVVGFDIGNENCVIAVVRQRGIDVLLNYESKRETPAVVCFGEKQRILGSAGAASAMMHIKSTISQIKRLIGRKFADPDVEKELKMLPVETSEGQDGGILIHLKYMGEIHVFTPVQLLSMLFAHLKTMTEKDLEMPISDCVIGIPSYFTDLQRRAYLDAAKIAGLKPLRLIHDCTATALSYGMYKKDFGSAGPVNVAFIDIGHCDTQVSIASFEFGKMKILSHAFDRSLGGRDFDEVIFCHFAAKFKEEYHIDVYSNTKACFRLRAACEKLKKVLSANLEAPLNIECLMDEKDVKGFITREEFEKLASGLLERVSIPCRRALIDANLTEEKISSVELVGSGSRIPAISTLLTSLFKREPSRQLNASECVARGCALQCAMLSPIYHVREYEVKDVIPFSIGLSSDEGPVAVRSNGVLFPRGQPFPSVKVITFRRSDLFHLEAFYANPDELPPGTSPIISCVTIGPFHGSHGSKIRVKVRVPLDLHGIVSIESATLIKDDLVMAGDYHSNSDAMDIDPISETVTNGFEDNTNKNLESPCSSADGTRKDNRRLNVPVNENVYGGMTKAEILEAHEKELQLAHQDRIVEQTKEKKNSLESYVYDMRSKLFHTYRSFASEQEKDDISRTLQETEEWLYEDGVDETEHAYSSKLEDLKRLVDPIENRYKDDKERVQATRDLSKCILKHRASADSLPTQDKELIINECNKVEQWLEEKIQQQESFPRNTDPILWSSDIKSKTEELNLKCQQILGSKASPSPEDKDKPDTFNDP* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0807 766 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 758 - -
Gso18g0807 766 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 534 IPR029047 -
Gso18g0807 766 CDD HSPA4_like_NDB 2 381 - -
Gso18g0807 766 Gene3D - 186 360 - -
Gso18g0807 766 Gene3D - 5 374 - -
Gso18g0807 766 PRINTS 70kDa heat shock protein signature 2 15 - -
Gso18g0807 766 PRINTS 70kDa heat shock protein signature 30 42 - -
Gso18g0807 766 PRINTS 70kDa heat shock protein signature 140 160 - -
Gso18g0807 766 PRINTS 70kDa heat shock protein signature 332 348 - -
Gso18g0807 766 PRINTS 70kDa heat shock protein signature 363 383 - -
Gso18g0807 766 PRINTS 70kDa heat shock protein signature 388 407 - -
Gso18g0807 766 PRINTS 70kDa heat shock protein signature 472 488 - -
Gso18g0807 766 Pfam Hsp70 protein 3 662 IPR013126 GO:0005524|GO:0140662
Gso18g0807 766 SUPERFAMILY Actin-like ATPase domain 193 381 IPR043129 -
Gso18g0807 766 MobiDBLite consensus disorder prediction 752 766 - -
Gso18g0807 766 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 385 595 IPR029047 -
Gso18g0807 766 Gene3D - 562 673 IPR029048 -
Gso18g0807 766 PANTHER HSC70CB, ISOFORM G-RELATED 1 758 - -
Gso18g0807 766 MobiDBLite consensus disorder prediction 744 766 - -
Gso18g0807 766 Gene3D Actin; Chain A, domain 4 230 313 - -
Gso18g0807 766 MobiDBLite consensus disorder prediction 525 547 - -
Gso18g0807 766 Gene3D - 38 113 - -
Gso18g0807 766 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 564 662 IPR029048 -
Gso18g0807 766 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Gso18g0807 766 MobiDBLite consensus disorder prediction 525 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0807 Gso-Chr18 10170355 10176572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0807 2 658 Miscellaneous Gene Families AT5G28540 28.765 2.20e-79 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0807 K09489 - gmx:100808218 1508.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0807 18 10170355 10176572 Gso8g2614 8 43795370 43801616 GST