Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0743 ATGCTTCCTCAACGCATGAAGAAAGCCATCACTGATAACCCTAAGAAGCTTGCCAACTTGATTGACCTCGTCAACCTTCCATCCACGCTAAGAGAATTTGTGGGTCAGTCTCAGATTTCCCGCTTAGGCTGTTTTAAGTGCGTTTGGTTTTACATCAAAACCAATAATCTTCAGTTTCCAACTTGCAAATACAAACCATCTTCAGCAGCACCAGCATGTGATATCGGTTATTGCTTGCTCACAGTCAGGTGA 252 0.4325 MLPQRMKKAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCVWFYIKTNNLQFPTCKYKPSSAAPACDIGYCLLTVR* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0743 83 Gene3D SWIB/MDM2 domain 18 65 IPR036885 -
Gso18g0743 83 PANTHER OS09G0133000 PROTEIN 2 63 - -
Gso18g0743 83 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 2 63 - -
Gso18g0743 83 Pfam SWIB/MDM2 domain 24 61 IPR003121 -
Gso18g0743 83 SUPERFAMILY SWIB/MDM2 domain 12 63 IPR036885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0743 Gso-Chr18 8880629 8888843 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Gso18g0743 SWIB 7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0743 - - gsj:114395631 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0743 18 8880629 8888843 Gso8g2663 8 44298767 44301469 GST