Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0693 ATGGCATCAAACCAGATCCTGAAAGAGCTACAATGGGCTCAGCAAGCTATCAAATCTGAGGGCCTAAATCTGCACAGTATTTCCTTCTACCTGTCCCAACCAACCTCAGGCTGCTATCAAGAAACAGACAACTCCATAAGCATAAACATTTCCAAGGAAAACCTTCCATTCTTTTCCCACCTCTTGACAACTCTAGCAGCACCTAGGAGCACCAACTCTTCTTCCTTGAGAAACTTGGAGTTCCACAGAGTTGAATGGGACTCACAAAAGGTAAGAAATCTTGGCACCTTGCTTGGGAATAACCAAAATGTACAACAAGTGGTTTTTAGAAGAAACAGGTTCAATGGAAAAAGCCTGTCAGAGCTTTCTGACATTCTTAAGGCTAATAAAGTGATCAAAGAGATCATGCTTTCAGAATCAGGTATCGGGTCTGTTGGAGCTGGGCTCATTGCTTCTGCTCTTGTGGTGAATGATAGTTTGGAGGAGCTGCAGATATGGGAAGATTCAATAGGGTCAAGAGGTGCTGAGGAGCTCTCCAAGATGATTGAAGTTAACTCAACTCTTAAGCTTTTGACAATTTTTGACTCAAATGCCATCACAGCTACCCCTCTTATATCAGCAGTTTTGGCAAGGAACAGAACGATGGAAGTTCATGTTTGGAGTGGGGAAAATGGGGACAAAAGTTTCAAGGTGGTTGAGTTTGTACCGGAGAACAACACACTTAGAATTTACAAGCTTAACCTCTCAGGTGCATGTAGGGTTATTTGCTCTTTAGGGATGAACTTCACTGTGAAGTCGCTTGACTTGACCGGCGTCAAGCTAAAGTCACAGTGTGCTAAGGAATTTAGGTGGGTTTTGGAACAAAACCAGACCCTCAAAGAGGTAAACTTGTCCAGAACATGCCTTAAAGACAAGGGCATTGTGTATGTTGCAGCTGGCCTCTTTAAGAACAGAAGTCTGCAAACCTTACATCTTAGCGGTAATTGGTTCAATGGAGTAGGTGTGGAGCATCTACTATGCCCTTTGAGTAGATTTTCAGCACTGCAAATGCAAGCCAACACTACTTTGACATGTGTTACTTTTGGAGGAGGGAGGACAAGAATAGGAAGGGATGGTCTAGCTGCTATTATACAGTTTCTAATTAGCAATGAAACAGTGAGGAAGTTGGGGATTCATGATGATGAGAGTTTGAGATCGGATGACTTTGTGAAAATCTTCAAGAGTTTGGAGAAGAATGCTAGCTTGAAATGTTTGTCTGTACAAGGCTGCAAACGTGTGGAGGGAGAGACATTGCTGCATACAATTATGGAGACAATACAGATAAATCCTTGGATTGAAGATATTGATCTCTCAAGAACACCTTTACACAACTCTGGAAAGACTCGGGGAATTTATCAGAGATTAGGCCAGAATGAGAAGACTGAACCAGAAATGGATTTGGTCAAGGACATGCCACTAACAGAACCCAAGAGTTGCAGAGTTTTTTTTTGTGGTCAAGAATGTGCAGGCAAAACCACACTTTGTCATTCAATATCACAAAATTTCTCTGCTTTATCACTTCCCTACTTGGATCAAGTCAGAACAATTGTGAACCCAGTGGAGCAGGCTGTCAAAGCAGTAGGAATGAAGATAAAAACTTTCAAGGATGAGGATACAAGGATTTCAATATGGAATCTTGCTGGTCAACATGAGTTTTTATCCCTCCATGATCTCATGTTCCCAGGGCATGGGAGTGCATCATTTTTCATCATCATATCAAGTTTATTTAGGAAACCAAGTAACAAAGAACCAAAAAGTTCAACTGAAATTGAAGAAGACCTGCAATATTGGCTCAGGTTCATAGTCTCCAACTCTAAAAGGGCAATACAACAATGCATGCTACCAAGTGTCGCTGTTGTTCTCACACACACTGATAAAATCAACCAACCATCACAAAATTTGCAGCACACAGTAGATTCAATACAGAGATTGAGAGACAAGTTCCAAGGCTATGTTGAATTCAACCCAACTGTATTCACAGTTGATGCAAGATCATCAGCATCAGTTAGTAAACTCACTCATCATATCCGAAAGACAAGCAAGACAATTCTCCAAAGAGTGCCGCGAGTTTATCAACTTTGCAACGATTTGATACAGATTTTATCAGACTGGAGATCTGAGAACTACAACAAGCCAGCAATGAAGTGGAAGGAGTTTGGTGAGCTATGCCAAGTTAAAGTTCCGTTGTTGAGAATTCAATCAAGAAATGAAAATAAAGAGAGGGTGGAAATGAAGAGAAGAGCTATTGCTACCTGTCTTCATCACATTGGTGAGGTGATTTACTTCGATGAGTTGGGGTTTCTAATTTTAGATTGTGAGTGGTTCTGTGGTGAAGCACTTGGTCAGCTGATAAAGTTGAATGTTAGGAAGCAACATTCCTCAGAAAACAATGGATTTGTTAGCAGGAAGGAACTGGAAAAAATCTTAAGAGGAAGTTTGCAGAGCCCTATTCCTGGTATGGGTTCGAAGGTATTTGAGAACTTAGATACTAGTGATCTTGTGAGGATGATGCTAAAACTTGAACTTTGTTATGAGCAAGACCCATCAGATCCAAATTCTCTGCTATTGATTCCTTCCATTCTTGAAGAAGGAAGAGGAAAGCCTCAGAAGTGGCAGCTAAGCATGCCAGACTGTGTTTATGCTGGACGTCACCTCGAGTGTGATGATTCAAGCCACATGTTTCTAACTCCCGGATTCTTCCCTCGTTTACAGGTGCACCTTCACAACAGAATAGAGGCTCTAAAGGATCAACATGGGGCAACTTACAGTCTTGAGAAGTGCATCATATCAATCTGCATTAATGGAATCTACATAAGAGTAGAACTTGGAGGACAATTGGGTTACTATATTGATGTCCTTGCATGCTCCACCAAAAACTTGTCTGAAACTTTAAGAGTCATTAATCAACTTATAATCCCTGCAATCCAAAGTGTTTGCCATGGGATCACCTTGACTGAAAATGTCATAAGACCTGAATGTGTGAGAAAACTGACACCCCCTAGATACAGAAAAACTCAATTTGCTTCCATGCAGCAACTTAAACAAGCATTACTTTCACTTCCAGCAGACAGCATGTATGATTATCAACACACATGGAGTCCAGTCCTAGACTCTGGTAGGCCAATTCTCCAAGATGGATTTGATTTTGCTCGGGACCTTTTATCCGATGATGACTTCCGGGAAGTGTTGCATCGAAGGTATCATGACCTGTACAATCTTGCACAAGAGCTGCAAGTCCCACCTGAAAATAACCCTGAAGGGCAAGGTCAATCTATAACCATGAGTAATGAAGCTGCAAAGGTTGAACCAACCTTTGGTGGCATTGCAAAAGGGGTTGAAGCAGTTTTAGAAAGACTCAAGATTATAGAACAAGAAATCAGAGACTTGAAACAGGAAATCCAGGGGCTGAGATACTATGAACATAGACTTCTCCTTGAGCTTCATCGCAGAGTGAACCACCTAGCAACCTTCAATGTCCAGGTTGAGGAGAGGAAAGTCCCCAACATGATCTATTTTGTTAAGACAGAAAACTACACAAGGAGACTGGTCACTGCCATGCTTTCAGGTATGAATGCTCTCCGGCTTCACATGTTATGTGAGTTCCGGGGACAAATGCATGTTGTTGAAGATCAGTTGGGGTGTGAAATCATGCAAGTTGATAATGCGGCTGTGAAGTCTTTGGCTCCATATATGAAGAAGTTCATGACACTGGTAACTTTAGCTCTCAAAATAGGAGCTCATCTTGCAGCAGGGATGGGGCAAATGATACCAGACTTGAGCAAGGAGGTGGCTCATTTGGCTGGCTCTTCAGTTCTCTGTGGTGCAGCTGGGGCAACTGCTGCTGGTGTTGTAGGGGTGGCCGCTATGGATCGTAGAAACAGGTCCATTGAAGGTTCAAGGGACATTCAACAAGACTTAAGAGCAGCACAACAATGGGTGGTTGATTTCTTAAGGGAAAGAAGATGCTCCTCAGGGAAGGATATTGCAGAGAAATTTGGACTGTGGCGAATAAGGTATAGGGACAATGGTCAAATTACATGGATATGCAGGCAGCACATGTATGCCAGATCTGCAGAGATAATCGAAGTGCCTGTTTGA 4137 0.4211 MASNQILKELQWAQQAIKSEGLNLHSISFYLSQPTSGCYQETDNSISINISKENLPFFSHLLTTLAAPRSTNSSSLRNLEFHRVEWDSQKVRNLGTLLGNNQNVQQVVFRRNRFNGKSLSELSDILKANKVIKEIMLSESGIGSVGAGLIASALVVNDSLEELQIWEDSIGSRGAEELSKMIEVNSTLKLLTIFDSNAITATPLISAVLARNRTMEVHVWSGENGDKSFKVVEFVPENNTLRIYKLNLSGACRVICSLGMNFTVKSLDLTGVKLKSQCAKEFRWVLEQNQTLKEVNLSRTCLKDKGIVYVAAGLFKNRSLQTLHLSGNWFNGVGVEHLLCPLSRFSALQMQANTTLTCVTFGGGRTRIGRDGLAAIIQFLISNETVRKLGIHDDESLRSDDFVKIFKSLEKNASLKCLSVQGCKRVEGETLLHTIMETIQINPWIEDIDLSRTPLHNSGKTRGIYQRLGQNEKTEPEMDLVKDMPLTEPKSCRVFFCGQECAGKTTLCHSISQNFSALSLPYLDQVRTIVNPVEQAVKAVGMKIKTFKDEDTRISIWNLAGQHEFLSLHDLMFPGHGSASFFIIISSLFRKPSNKEPKSSTEIEEDLQYWLRFIVSNSKRAIQQCMLPSVAVVLTHTDKINQPSQNLQHTVDSIQRLRDKFQGYVEFNPTVFTVDARSSASVSKLTHHIRKTSKTILQRVPRVYQLCNDLIQILSDWRSENYNKPAMKWKEFGELCQVKVPLLRIQSRNENKERVEMKRRAIATCLHHIGEVIYFDELGFLILDCEWFCGEALGQLIKLNVRKQHSSENNGFVSRKELEKILRGSLQSPIPGMGSKVFENLDTSDLVRMMLKLELCYEQDPSDPNSLLLIPSILEEGRGKPQKWQLSMPDCVYAGRHLECDDSSHMFLTPGFFPRLQVHLHNRIEALKDQHGATYSLEKCIISICINGIYIRVELGGQLGYYIDVLACSTKNLSETLRVINQLIIPAIQSVCHGITLTENVIRPECVRKLTPPRYRKTQFASMQQLKQALLSLPADSMYDYQHTWSPVLDSGRPILQDGFDFARDLLSDDDFREVLHRRYHDLYNLAQELQVPPENNPEGQGQSITMSNEAAKVEPTFGGIAKGVEAVLERLKIIEQEIRDLKQEIQGLRYYEHRLLLELHRRVNHLATFNVQVEERKVPNMIYFVKTENYTRRLVTAMLSGMNALRLHMLCEFRGQMHVVEDQLGCEIMQVDNAAVKSLAPYMKKFMTLVTLALKIGAHLAAGMGQMIPDLSKEVAHLAGSSVLCGAAGATAAGVVGVAAMDRRNRSIEGSRDIQQDLRAAQQWVVDFLRERRCSSGKDIAEKFGLWRIRYRDNGQITWICRQHMYARSAEIIEVPV* 1379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0693 1378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 489 692 IPR027417 -
Gso18g0693 1378 Pfam Leucine Rich repeat 316 338 IPR001611 GO:0005515
Gso18g0693 1378 Pfam Leucine Rich repeat 288 309 IPR001611 GO:0005515
Gso18g0693 1378 SMART LRR_RI_2 317 344 - -
Gso18g0693 1378 SMART LRR_RI_2 129 156 - -
Gso18g0693 1378 SMART LRR_RI_2 157 184 - -
Gso18g0693 1378 SMART LRR_RI_2 289 316 - -
Gso18g0693 1378 Pfam C-terminal of Roc, COR, domain 754 925 IPR032171 -
Gso18g0693 1378 SUPERFAMILY RNI-like 11 460 - -
Gso18g0693 1378 Gene3D Ribonuclease Inhibitor 348 479 IPR032675 -
Gso18g0693 1378 Gene3D Ribonuclease Inhibitor 52 218 IPR032675 -
Gso18g0693 1378 PANTHER PROTEIN TORNADO 1 1 1367 - -
Gso18g0693 1378 Gene3D - 491 695 IPR027417 -
Gso18g0693 1378 Coils Coil 1125 1152 - -
Gso18g0693 1378 Gene3D Ribonuclease Inhibitor 233 347 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0693 Gso-Chr18 7899800 7905825 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0693 - - gmx:100784182 2679.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0693 18 7899800 7905825 Gso8g2691 8 44557511 44563678 GST