Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0652 ATGCAGCTCCTCCGGGCGGTGCTCGCGGCGGCGCTGCTCCTCCTCGCCACTCTCTCCGACGCCCACAACATCACAACCATCCTCTCAAAGCACCCTGAGTTCTCCACCTTCAACCACTACCTGACCCTGACCCACCTGGCCCCGGAAATCAACGGCAAAACCACCATCACCGTCTGCGCCGTGGACAACGCCGCCATGTCGGACCTCCTCAGCAAGCACCCCTCCATTTACACCATCAAGAACATCCTCTCCCTCCACGTCCTCCTCGACTACTTCGGCGCCAAGAAGCTCCACCAGATCACCAACGGCACCGCCCTCGCCGCCACCATGTACCAGGCCACCGGCAGCGCTCCCGGATCCGCCGGCTTTGTCAACATCACCGACCTCCACGGCGGAAAGGTCGGCTTCGGCGCCGAAAACAACGACGGCACACTCTCCTCAACTTTCGTCAAATCCGTAGAAGAAATCCCTTACAACATCTCAGTAATCCAGATCAGCAAAGTTCTTCCCTCTGCCGCAGCGGAAGCCCCTGCACCCGCACCCACCCAACAAAACCTCACCAACATTATGTCAAAACACGGATGCAAGGTCTTCGCCGACGCTCTCTCTGCTCAACCCGACGCGCTTAACACCTTCAATGACAACCTCGACGGGGGCTTAACCGTCTTTTGCCCCCTCGACGACGCGTTCAAAGCGTTTCTCCCCAAATTCAAAAACCTAACCAAATCCGGTAAGGTCGCGCTTCTCGAATTCCACGGTGTTCCGGTTTACCAGTCCAAAGCCACTCTCAAATCCAACAACGGACTTCAGAACACTCTCGCCACTGATGGCGCTAACAAGTTCGACTTCACTGTTCAGAACGACGGTGAAGATGTTACTCTGAAAACGAAGCTCACCACTGCGAAGATCACCGACACGTTGATTGACGAACAGCCTCTCGCGATTTTCGCTATTAGTAAGGTGCTTCAGCCCAAGGAGCTGTTTAAGGGTGAGGCGGAGGCTCCGGCGCCTGCGCCGGAGCCTTCTGCCGCCGACGCTCCTGCGCCGGCGAAGAAGGGGAAGAAGAAGAAGAAGGCGGCTGATGCGCCGGCGGATGATTCTGATGCTCCTGCTGATTCTCCCGATGATGCTGCTGATGTGACCGCCGATGACAGTAACGGCGCCGTTAAAACTAACGGCGGGAGGTACGGTGGTGGTGTTGTTGCCTTGGCTTTAGGTTTGGTTTTGGGGTTACCGTTAGTGCTGTGA 1248 0.5697 MQLLRAVLAAALLLLATLSDAHNITTILSKHPEFSTFNHYLTLTHLAPEINGKTTITVCAVDNAAMSDLLSKHPSIYTIKNILSLHVLLDYFGAKKLHQITNGTALAATMYQATGSAPGSAGFVNITDLHGGKVGFGAENNDGTLSSTFVKSVEEIPYNISVIQISKVLPSAAAEAPAPAPTQQNLTNIMSKHGCKVFADALSAQPDALNTFNDNLDGGLTVFCPLDDAFKAFLPKFKNLTKSGKVALLEFHGVPVYQSKATLKSNNGLQNTLATDGANKFDFTVQNDGEDVTLKTKLTTAKITDTLIDEQPLAIFAISKVLQPKELFKGEAEAPAPAPEPSAADAPAPAKKGKKKKKAADAPADDSDAPADSPDDAADVTADDSNGAVKTNGGRYGGGVVALALGLVLGLPLVL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0652 415 Gene3D FAS1 domain 20 165 IPR036378 -
Gso18g0652 415 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6 395 IPR033254 -
Gso18g0652 415 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 6 395 - -
Gso18g0652 415 MobiDBLite consensus disorder prediction 331 395 - -
Gso18g0652 415 SUPERFAMILY FAS1 domain 178 325 IPR036378 -
Gso18g0652 415 ProSiteProfiles FAS1/BIgH3 domain profile. 182 322 IPR000782 -
Gso18g0652 415 Gene3D FAS1 domain 166 325 IPR036378 -
Gso18g0652 415 ProSiteProfiles FAS1/BIgH3 domain profile. 21 169 IPR000782 -
Gso18g0652 415 SMART fasc_3 57 172 IPR000782 -
Gso18g0652 415 SMART fasc_3 221 325 IPR000782 -
Gso18g0652 415 Pfam Fasciclin domain 194 324 IPR000782 -
Gso18g0652 415 Pfam Fasciclin domain 32 109 IPR000782 -
Gso18g0652 415 SUPERFAMILY FAS1 domain 27 169 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0652 Gso-Chr18 7229965 7231594 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0652 - - gmx:100810878 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0652 18 7229965 7231594 Gso8g2730 8 44985179 44986762 GST