Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0650 ATGTCTCTGGGGTATGCCGAGAAGCTTTCCTACATAGAAGATGTGGGCAACGTTGGAATGGTCGAATATTTCGACCCATCCCATGTTTTGCGAGAGAAAATAGATCAACTTGCTATCATGATAAAAAAGAGTAAGCATCTAGTGGTGTTTACTGGTGCAGGAATATCAACTTCTTGTGGTATACCTGATTTTCGAGGTCCCAAGGGAATTTGGACACTTCAGCGTGAAGGTAAAGCCCTGCCTGAAGCATCACTGCCATTTCATCGTGCAGCGCCAAGCATGACACACATGGCTCTGGTTGAATTAGAAAAGGCTGGCATTTTGAAGTTCGTCATCAGTCAGAATGTTGATGGTCTCCATCTTCGATCTGGAATACCAAGGGAGAAACTTGCTGAATTGCACGGGAATTCCTTCATGGAGACATGCCCTTCTTGTGGAGAAGAGTACTTTCGTGATTTTGAGGTAGAAACTATTGGTTTAAAGGAGACTTCAAGGCGTTGTTCAGTTGCCAAATGTGGGACTAGACTTAAGGATACAGTCCTTGACTGGGAGGATGCATTGCCTACAAAGGAGATGAATCCTGCTGAGAAGCATTGCAAACAGGCAGATATAGTGTTATGCCTGGGTACAAGTTTACAAATAACTCCAGCATGCAACTTGCCTCTGAAAGCACTTCGTGGTGGGGGTAAAGTTGTTATTGTAAATCTCCAGAAAACTCCAAAGGACAAAAAAGCCAGTTTAGTCATACATGGGTTTGTAGATAAGGTAATTGCGGGTGTCATGGACCAGCTTAATATGCAGATTTCTCCATTTGTCAGGATTGATCTTTTCCAGATTATTCTAGTGCAAGCTTTGAGTAACGATAAAAGATATGTGAACTGGACTCTCCAGGTTGCAAGTGCTCATGGACAAAAAGCAGCATTGCCTTTCATCAAGTCTGTTGAGATCTCCTTCTTGGACAGGGAAGATTATAAAGCAGCCATTCTGGATAAGCAACCATTTCGGCTTAAAAGGAGAACAGCATATAACAAAGCATTTGAAATGGTTCTGAAACTCAACTTTAGCGATGGCTGTGGTTGCTCATCCCTTGAAATTGATGTCCCTGTTGATTTTAAGGTTTCAACTGACTGCTTTGACTTTGATAAGGACTACATATTCCAAAAGCTGAGAGACAAGGCAGTTCTTGAATCAAGATGTGGTCAGAATGCTGTTATTGAGAGAAAGACCATCTTGACACCTAGAAGTGATGTCACTACCTATGCCATTGTGACCAATGTTGTTCAGTACGGCAAAGCATGTAAAGCAGCCCTTGATTCTCTTAGTAATGGTGATTTTAAAAAAAGAAAAGCTAGTGTGACTGGTACTGGATCATCTAGGAAGCGTTCAAAGGGGTCCTCCAAGTGTAAATCTAGATCAGACAATATTAGGGGTCATACGTAG 1440 0.4208 MSLGYAEKLSYIEDVGNVGMVEYFDPSHVLREKIDQLAIMIKKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPEASLPFHRAAPSMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMETCPSCGEEYFRDFEVETIGLKETSRRCSVAKCGTRLKDTVLDWEDALPTKEMNPAEKHCKQADIVLCLGTSLQITPACNLPLKALRGGGKVVIVNLQKTPKDKKASLVIHGFVDKVIAGVMDQLNMQISPFVRIDLFQIILVQALSNDKRYVNWTLQVASAHGQKAALPFIKSVEISFLDREDYKAAILDKQPFRLKRRTAYNKAFEMVLKLNFSDGCGCSSLEIDVPVDFKVSTDCFDFDKDYIFQKLRDKAVLESRCGQNAVIERKTILTPRSDVTTYAIVTNVVQYGKACKAALDSLSNGDFKKRKASVTGTGSSRKRSKGSSKCKSRSDNIRGHT* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0650 479 Gene3D YEATS domain 270 380 IPR038704 -
Gso18g0650 479 MobiDBLite consensus disorder prediction 446 479 - -
Gso18g0650 479 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-(6/7) FAMILY MEMBER 1 470 - -
Gso18g0650 479 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SRT1 1 470 - -
Gso18g0650 479 Gene3D - 36 262 - -
Gso18g0650 479 Pfam Sir2 family 86 216 IPR003000 GO:0070403
Gso18g0650 479 Pfam Sir2 family 52 75 IPR003000 GO:0070403
Gso18g0650 479 MobiDBLite consensus disorder prediction 446 461 - -
Gso18g0650 479 Gene3D - 135 184 - -
Gso18g0650 479 SUPERFAMILY DHS-like NAD/FAD-binding domain 5 291 IPR029035 -
Gso18g0650 479 CDD SIRT7 45 251 - -
Gso18g0650 479 ProSiteProfiles Sirtuin catalytic domain profile. 35 269 IPR026590 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0650 Gso-Chr18 7168586 7185990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0650 K11416 - gmx:100803586 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0650 18 7168586 7185990 Gso8g2732 8 45018265 45029611 GST