Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0642 ATGGGTAGCAGCGACACGTCTTCTTCGGATTTCTTCTGCCGCCGCCACGTGTTCCTCTGCTACAAGAACCCCGCCGTGTGGCCGCCGCGCATTGAGGCTGCCGAGTTTGATCGCCTGCCAAGGTTGCTCCACGCCGCCATCAATGCCAGAAAGCCTCATATCAAGAAAGAGACCTGCTTAACAATATGTGAGGGGCATGATGGGACTGAAACATCAAATGGAGATGTATTAATTTTTCCAGACATGATCAGATATAGGAGATTAACCCATTTTGATGTTGAGACATTTGTTGAAGAAGTTCTAGTCAAAGAAGGAAACTGGCTTCCTGGAAACCCTGAATCATTAAAAGCGTCATATGTTTTCGTATGCTCACATGGATCCCGTGATCGTAGGTGTGGGGTTTTTGGACCTATCTTGGTCAGTAGATTCAGGGAAGAGATAGAGTTACATGATCTTCTAGGCAAAGTGTTGATTAGCTCGTGCTCACACATTGGGGGAAATAATTATGCAGGAAATGTCATTATATTTGGATCAAGTATCAACAGAGAAGTCACTGGGCACTTGTATGGATATGTTACTCCAGATGATGTACCTTTATTGTTTCGCCAGCATATCATTCAAGGGGAGATTTTTGACTCACTATGGAGGGGTCAAATTGGTTTATCAGAAGATGAACAGAAGAAAAAGCAAGAACAAAGGCTTCAGCTGAATGGTGGAAGAAATTTAGGAGGCATGGGTGCTGGCTGCTGTCAAACAGACGGAGAGAGCTGTTGCCAAGACAACGAAGACTCTTGTTGTTGTCAGAATGATGTATTAGAGGAAATGACAGAGCTCTCAGCTGATAATAAGAGAAGGGAGAATGTGAATGTGATTTCTCGGATCAACAAGGGTAAAGGAGCCTCACTTAAGTTTAGTTCCATGCCAACATGGCTTGACAGCTGGGAGCAGGAGGATACTTATGCTGCTTTTGCTGTTGTTTGTGCCGCTGTGTCAGTTGCCATTGCCTATAGCTGCTACAAACAGATGAGATGA 1032 0.4457 MGSSDTSSSDFFCRRHVFLCYKNPAVWPPRIEAAEFDRLPRLLHAAINARKPHIKKETCLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVETFVEEVLVKEGNWLPGNPESLKASYVFVCSHGSRDRRCGVFGPILVSRFREEIELHDLLGKVLISSCSHIGGNNYAGNVIIFGSSINREVTGHLYGYVTPDDVPLLFRQHIIQGEIFDSLWRGQIGLSEDEQKKKQEQRLQLNGGRNLGGMGAGCCQTDGESCCQDNEDSCCCQNDVLEEMTELSADNKRRENVNVISRINKGKGASLKFSSMPTWLDSWEQEDTYAAFAVVCAAVSVAIAYSCYKQMR* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0642 343 Pfam Sucrase/ferredoxin-like 14 217 IPR009737 -
Gso18g0642 343 Gene3D Glutaredoxin 117 217 - -
Gso18g0642 343 SUPERFAMILY Thioredoxin-like 119 221 IPR036249 -
Gso18g0642 343 CDD TRX_Fd_Sucrase 118 219 IPR009737 -
Gso18g0642 343 PANTHER SUCRASE-LIKE PROTEIN 12 342 - -
Gso18g0642 343 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 12 342 IPR009737 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0642 Gso-Chr18 7089163 7093279 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0642 - - gmx:100791417 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0642 18 7089163 7093279 Gso8g2741 8 45108555 45117306 GST
Gso18g0642 18 7089163 7093279 Gso14g0113 14 1002106 1004915 PCT
Gso18g0642 18 7089163 7093279 Gso2g2559 2 49884574 49887544 PCT
Gso14g0113 14 1002106 1004915 Gso18g0642 18 7089163 7093279 PCT
Gso2g2559 2 49884574 49887544 Gso18g0642 18 7089163 7093279 PCT