Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0637 ATGGCTCCCGCAAGGAAGAAACCTTCTAAGCCAAGCAAATCTCCTAAGAACCCTAAGAAGATCCAACCCAAGCACGATTCCAGCTCCGAATCCGAAGAAGACACGCCGCCGCAGCAACTGCAACCGGAGCAACTCGAACTAGGCGACAACTCCGATTCCGCGTCGGAGCTCTCTTCTGTCGGTGACGATCCTTTAGCCGACGATTTCCTCCAAGGAAGCGATGACGACGAAGAGAAAGCCTCAGGTTCGGAGTCAGGTTTGGAGTCAGGTTCGGATTCCGATTCGGATGACGATGACATTGAAAAGAAGTCGAGAGCTATTGATGAAGAGAAGGCGAGAGAGGAAGAGGATGCGGATGCCGAAATGCAGCTCAACATCAACCAAGAGTCTGATGAGTTCAGATTGCCTACCAAAGAGGAGCTTGAGGATGAGGCTCTCCGCCCACCTGATCTTTCCAATCTCCAGAGGAGAATCAAAGAGATTGTTCGTGTTCTTTCAAATTTTAAGGCTTTGAGGCAAGATGGGTCAACAAGAAAGGAGTATGTTGAACAGCTTAAGAAAGATTTATGTACGTACTATGGCTACAATGAGTTTCTAATTGGTGCTCTAGTGGAGATGTTTCCAGTTGTTGAACTCATGGAACTGATTGAAGCCTTTGAAAAGCCACGCCCTATGTGTCTAAGGACTAATACATTGAAGACACGCAGACGGGATTTGGCGGATGTTTTGATAAATAGGGGAGTAAATTTGGATCCTTTAAGCAAGTGGTCAAAGGTTGGACTTGTTGTGTATGATTCTCAAGTGCCTATTGGTGCCACTCCGGAGTATATGGCTGGTTTCTACATGCTGCAAAGTGCAAGCTCTTTTCTGCCTGTTATGGCTTTGGCTCCTCAAGAGAAGGAACGTGTCATTGATATGGCAGCTGCACCTGGTGGTAAAACAACTTACATTGCTGCTCTAATGAAGAATACTGGAATAATATTTGCAAATGAAATGAAGGTACCAAGGCTCAAGTCATTGACTGGAAATTTGCATCGCATGGGTGTATCTAATACTGTAGTGTGTAACTATGATGGAAAGGAGCTTCCGAAGGTTTTAGGTGTCAATGTTGTTGATAGAGTATTATTGGATGCTCCTTGCAGTGGAACTGGGGTTATATCCAAAGATGAGTCAGTTAAAACCTCTAAAAGTCTGGAAGATATACAGAAATGTGCGCATCTACAAAAGGAGCTCATTCTTGCAGCAATTGACATGGTGGATGCTAATTCAAAATCTGGGGGATATATTGTTTATTCTACATGCTCAATTATGGTTGCCGAGGTTCGTTTTTCAGTTGAATCTATTAAGTTGATATGCTCTTTTTGCTTTTTTATTTGTCATATGTTTCTAAATTTTCTTTCATTAAATATTCTTCAGAATGAAGCAGTTATTGACTATGCACTCAAAAAGCGGGATGTTAAACTGGTTCCTTGTGGACTTGATTTTGGGCGTCCAGGATTTACAAGGTTTAGGGAACAACGTTTTCACCCTTCTTTAGAAAAGACAAGGCGTTTCTATCCTCACGTACAGAATATGGATGGTTTTTTTGTGGCAAAGTTGAAAAAAATGAGCAGCTCAAAACCTGGGGCAAAATCATCAGAGACAGCCGAGAAGGAAGAAGACACTACCACGTTCGTGGAGGAAAAGGAGAAATCAAGTTATGGCATAAAAGAAAATGGCAATGTATCTTCTGAATCCGAATCCAAAAACGGGAAGAAAAGAAAATTCCCCTCGAAACCAAGTAATGGTCTAAAAGAAAAGGGCAAAGAATCTTCTGAATCTGAACCCAAAAAGAGGAATAAAAGGCTATTTCCATCTAAGGAAGAGATTTCAAAAGCCAGGGAGGAGAAAAGAAATGCTTTAAGAGAAAAAAACAGAAAAGGTAGCAAACGACAGAAGAAAAAATGA 1947 0.4196 MAPARKKPSKPSKSPKNPKKIQPKHDSSSESEEDTPPQQLQPEQLELGDNSDSASELSSVGDDPLADDFLQGSDDDEEKASGSESGLESGSDSDSDDDDIEKKSRAIDEEKAREEEDADAEMQLNINQESDEFRLPTKEELEDEALRPPDLSNLQRRIKEIVRVLSNFKALRQDGSTRKEYVEQLKKDLCTYYGYNEFLIGALVEMFPVVELMELIEAFEKPRPMCLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGIIFANEMKVPRLKSLTGNLHRMGVSNTVVCNYDGKELPKVLGVNVVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCAHLQKELILAAIDMVDANSKSGGYIVYSTCSIMVAEVRFSVESIKLICSFCFFICHMFLNFLSLNILQNEAVIDYALKKRDVKLVPCGLDFGRPGFTRFREQRFHPSLEKTRRFYPHVQNMDGFFVAKLKKMSSSKPGAKSSETAEKEEDTTTFVEEKEKSSYGIKENGNVSSESESKNGKKRKFPSKPSNGLKEKGKESSESEPKKRNKRLFPSKEEISKAREEKRNALREKNRKGSKRQKKK* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0637 648 Coils Coil 620 640 - -
Gso18g0637 648 MobiDBLite consensus disorder prediction 580 636 - -
Gso18g0637 648 ProSitePatterns NOL1/NOP2/sun family signature. 371 382 IPR018314 GO:0003723|GO:0008168
Gso18g0637 648 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 187 535 IPR029063 -
Gso18g0637 648 MobiDBLite consensus disorder prediction 1 143 - -
Gso18g0637 648 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 215 536 IPR001678 GO:0008168
Gso18g0637 648 PANTHER BNACNNG49010D PROTEIN 448 616 - -
Gso18g0637 648 PANTHER BNACNNG49010D PROTEIN 12 441 - -
Gso18g0637 648 TIGRFAM nop2p: NOL1/NOP2/sun family putative RNA methylase 227 445 IPR011023 GO:0003723|GO:0006396|GO:0008757
Gso18g0637 648 MobiDBLite consensus disorder prediction 545 568 - -
Gso18g0637 648 Pfam 16S rRNA methyltransferase RsmB/F 467 534 IPR001678 GO:0008168
Gso18g0637 648 Pfam 16S rRNA methyltransferase RsmB/F 292 447 IPR001678 GO:0008168
Gso18g0637 648 MobiDBLite consensus disorder prediction 538 648 - -
Gso18g0637 648 Pfam N-terminal domain of 16S rRNA methyltransferase RsmF 211 288 IPR031341 -
Gso18g0637 648 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 178 198 IPR023273 GO:0008168
Gso18g0637 648 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 211 223 IPR023273 GO:0008168
Gso18g0637 648 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 234 247 IPR023273 GO:0008168
Gso18g0637 648 MobiDBLite consensus disorder prediction 1 18 - -
Gso18g0637 648 MobiDBLite consensus disorder prediction 96 120 - -
Gso18g0637 648 PRINTS RNA (C5-cytosine) methyltransferase signature 275 289 IPR023267 GO:0001510
Gso18g0637 648 PRINTS RNA (C5-cytosine) methyltransferase signature 304 314 IPR023267 GO:0001510
Gso18g0637 648 PRINTS RNA (C5-cytosine) methyltransferase signature 372 384 IPR023267 GO:0001510
Gso18g0637 648 PRINTS RNA (C5-cytosine) methyltransferase signature 426 442 IPR023267 GO:0001510
Gso18g0637 648 PRINTS RNA (C5-cytosine) methyltransferase signature 518 535 IPR023267 GO:0001510
Gso18g0637 648 Gene3D Vaccinia Virus protein VP39 291 448 IPR029063 -
Gso18g0637 648 Gene3D Vaccinia Virus protein VP39 466 632 IPR029063 -
Gso18g0637 648 MobiDBLite consensus disorder prediction 33 58 - -
Gso18g0637 648 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 448 616 IPR023267 GO:0001510
Gso18g0637 648 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 12 441 IPR023267 GO:0001510
Gso18g0637 648 Gene3D Sun protein; domain 3 181 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0637 Gso-Chr18 7038104 7044542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0637 K14835 - gmx:100807160 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0637 18 7038104 7044542 Gso8g2745 8 45157056 45163868 GST