Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0610 ATGCATCTCTACAATGCATGGCTTCCGCCGCCGGTGGCGGCTCAGACCGCCGGCGAGCGAGACTCCTTCGCCCGCGTCATCGCCGCCGTCAAGTCCGCCTTCCGCTCCGATGATCCCGATTCCGTCTTCTCCACTCTCAAATTCATCTCCGTCCTCGACCTTTTCATAAAGGCAAAAAGTGATGTATCTTTGGAGGATGTCTGTAACCTTATTCAGATGGGCCTTGAGATATTTCATGTGTCCCGTAATAAGCTTTATGCCCAGGTTAGATGGGGAAATTTATTGGTCAGAATACTCAACAAATATAGGAAAAAGATTTCACTGACTATTGAATGGAGGCCACTGTATGATACACTGGTTAGCACACATTTTACTAGAAGTACAGGTCCAGAAGGTTGGAGAATAAGACAACGACATTTTGAAACTATAACTTCCCTTGTTCAGTCCTGCCGAAGATTCTTCCCATCAGGTTCTGCCTTTGAGATATGGTCTGAGTTTAAATCTTTATTGCAAAACCCATGGCATAATTCATCCTTTGAAGGTTCTGGATTTGCAAGACTGTTTCTCCCAACAAATCTTGATAATCAGGATTTTTATACACAGGATTGGATAACTGAGTGTATAGACTTGTGGGAATCTATACCAAATTGCCAATTCTGGAACAATCAATGGGCAGATGTTATAGCTCGTGTTGTAAAAAATTACCACAATGTTGATTGGGAGTGCTTCTTGCCTTTACTTTTTGCTAGATACTTGAATATGTTTGAGGTACCTGTTGCAAATGGAAGTGGATCATATCCCTTTTCGCTGGATGTCCCAAGAAACACTAGGTTTTTGTTCTCCAATAAAACTTCCACTCCTGCAAAGGCTATTGCCAAATCAATAGTATATTTACTAAAACGTGGTAGTTCATCACAAAAGCACTTTGAGAAATTGATCAACATTTTGGAACAATATTATCATCCCTCAAATGGGGGTCGATGGACCTATGCATTGGAGCGGTTTTTGTTTCATTTGGTGTTTCAATTTCAAAAGCGTCTACAGAATGAACAGCTGGGCATAAATAATAGCAGACCCACCGAACAGCATCTTGGGGAATCAGAGAGGGTTTTCTTTGTTAACTCAGTGCTAAAGTTAATTGACCGTGGTCAATACAGCAAAAATGAGCATCTCTCCGAGACAGTTGCTGCAGCAACTTCTATACTGTCCTATGTAGAACCCTCATTGGTTCTGCCATTTGTGGCATCTCGGTTTCAAATGGCCCTTGAGACGATGACTGCTACCCACCAATTGAAAATTGCAGTTATGTCAGTGGCATTTGTTGGGCGTTCACTATTTTATACATCTGTATCAGTTTCCTCCATGAAACCAATTGATCTTGGTGGTGGTGATGAAGCATTCATTGATCTTGTGGGGGTTTCATTATCCAATGCATTACTTGGCATGGATGCTAATGACCCTCCAAAAACCTTGGCTACCATGCAATTAATTGGTTCCATATTTTCAAATTTGGCTTTATTGGATGATAAAATTGATGACCTATCATTTATGCCGATGATCCGCTTTTCAGAGTGGCTGGATGAGTTCTTATGCCGTCTATTTTCCTTACTTCTACACTTGGAACCCAGCAGTGTTTTAAATGAAGGTCTGCAATCATCATCAGCAACAGGAACTTTCCTGGTTGACGATGGTCCATACTACTTCTGTGTGCTTGAAATTCTGTTTGGGAGGCTTTCACAATCACTGTATAATCAGGCTTTGAAGAAAATTTCCAAGTTTGTGAGGACAAATATTCTTCCTGGTGCTGTTGCAGAGGTTGGACTGCTTTGTTGTGCGTGTGTTCACTCGAACCCAGAAGAAGCAGTTAGTCAACTTGTTGAGCCAATATTACTGTCTGTGATATCTTCTTTGAAAGGAACACCACGCACTGGATTTGGAGGAGGAACTTTTGATGCTTCTGCTTCATCAAAGGTTAGATCCACAATTTCACCAGCTCTTGAGGCTTCAATTGACTATCAACTTAAGATATTGTCAGTTGGCATCACATATGGAGGTCCAGCGCTCCTCCATTACAAGGATCAATTCAAAGAAGCTATCTTCTTGGCTTTTGACTCACCATCTTGGAAGGTTAATGGGGCTGCTGATCATCTTCTTCGGTCCCTTCTCGGAAGTCAGATTCATTATTATCCAATAGATCAGTATAAGTGTGTTCTTAGTCACCCTGATGCTGTTGCTCTAGAAGAATGGATTAGCACAAAAGATTTTTCCACTGATGAAAGGTTGATCCCAAAGTGGCATATTCCTTGTGATGAAGAAGTTCATTTTGCAAATGAGCTTTTAGACATTCACTTCAAGTCTGCTTTGGATGATCTGTTGAAAATATGCCAGACTAAAATCCATGCTGACCAAGGAGATGAGAAAGAGCACTTGAAAGTGACTCTTTTGCGCATTGAATCATCGTTGCAAGGACTTTTTTCTTGTTTGCCCGATTTTGTCCCAGACTCCAGGAATGGAATGGTTGAAGATTCAAACCATATGTTTTTAATTGCTGGGGCAACAGGTTGTACTGTTGGTAGTACTGCTCTGAGAGAAAAAGCTACTGAGGTTGTACATGCAGCCTGCAAATATGTCCTGGAGAAAAAATCAGATGACAGCATCCTGTTGATACTTATTATTCGCATCATTGATGCTTTAGGAAACTATGGAAGTTTGGAGTATGATGAGTGGTCTAGTCACAGGCAGGCTTGGAAATTAGAATCTGCTGCCATAATAGAACCCCCCATTAATTTCATTGTGTCATCTCATTCTAAAGCAAAGAAAAGACCTAGGTGGGCTCTTATCGACAAGGCATTTATGCACAATACATGGAGGTCTTCGCAAGCATCCTATCATCTTTACCGTACAAGTGGGAATTTCTGCCCATCTGATCATGTGACTATGTTGATGGATGATTTGTTGAGTCTCTCTTTGCATAGCTATGAAACTGTCCGCCTGCTTGCAGGGAAATCTCTAGTGAAGCTGATCAAGAGATGGCCATCTATGATTTCAAAATGTGTTATCACTCTTACCCATAACTTGCAGGATCTCAATGCCAAGGAATATGCAGTGTTGGGTTCCTGTTCAGTCCTTGCCTCACAAACAGTTCTCAAGCATTTGACAACGGATCCAAAGTCATTCTCTTCATTTATCTTGGCAATTCTTTCAAGTTCGCATCATGAATCGTTGAAAGCTCAGAAAGCAATTAATGAGCTTTTTGTGAAGTACAACATTCAATTTTCTGGAGTATCTAGAAGCTTTTTCAGGATCTCAGACAAAGAAAATCATACTGGTGGACTGGGGTTTTCAGATTTGGTTTCTCAGATTGGCTCCATGAGTTTTGATTCTACTGGCTTGCATTGGAGGTATAACTTGATGGCTAATAGAGTGCTGCTCCTGCTGGCTTTGGCATCTCAGAACCATCCAAATTCATCATCTAAAATTCTGAGTGAAACTGCTGGACACTTCCTGAAGAATTTGAAAAGTCAACTTCCTCAGACAAGGATACTTGCAATTTCAGCTTTGAATACACTATTAAAAGAATCACCATATAAGCTGTCTCATGGTGAGAAATCTGCTGTACTTGAGGATTTGCAAGGCCATGTCAAATCATCACTTGAAGGAACTTTAACTCCAACTTTTCAGGAAGAGGGTTTCTTCAATGAGACATTGACTAGTCTTTCTCATGTTCATATAATAACTGATAGTGAAACTGCTTCAAGAGGAGGTCAGGGAGATTCAAGTTTCCAAAGCTTAGCAGACAAATCCATTACTCGTTTTTATTTTGAATTTTCGGCTTCATGGCCTCGAACGCCAAGTTGGATCTCCTTTTTAGGAAGTGATACATTTTACTCAAATTTTGCTCGTATTTTTAAACGACTAGTACAAGAATGTGGCATGCCTGTTGTATTGGCTCTTAAAGGTGCAGTAGATGAGTTTACAATTGCTAAGGAGAGGTCTAAACAATGTGTAGCTGCTGAAGCATTAGCGGGTGTGCTTCATTCTGATATTGATGGTCTATCAGGAACATGGGAAAGTTGGCTGATGCCTCAGTTGAAGAACATCATTTTAGCCCAATCTGTTGAATCAGTTTCAGAGTGGGCATCTTGCATACGATATGCAGTTACCGGTAAAGGAAAGTATGGAACAAGAGTTCCTCTTTTGAGACAGAAAATTCTGGATTCTTTGATGACACCTTTACCTCCAACAGTAGCTACCACAATAACAGCCAAGCGATATACTTTTCTGGCTGCTGCACTTATAGAAATATCCCCACAGAAAATGCCAGTAGCAGAAGTCCAGCTCCACAATACACTTCTGAAGGAAGTTCTTGGTAATATGTGCCACTCATCAGCCCAAGTGAGGGAGGCTCTAGGGGTTACCCTTTCTATATTGTGCTCTAACATTAGGCTCTATCATTCAAGCCGTCATGATAATGCACAGGATGAGAGAAACAACGATGTTGATAGTTTGATGAAAGATGAAAGCTGGGTTCAGTTTCTTACAGAGCGAGCAGCTGAAGCAGTTGTTAACATTCAGATTGCTACCCAATCAGATAAAGTAGTGAATCCTGTAGATACAAATTCTCAAAATGGGCATCTAGATGGTGATTCACAAGATTGCATTAAATGGATGGAAACGCTACTCTACTTCATCATCTCATCATTGAAGTCTGGGAGATCCTCATATCTACTCGACGTGCTTGTGGGGCTTCTATATCCTGTGATTTGCTTGCAGGAAACATCAAATAAGGATTTGTCAACATTAGCCAAGGTAGCATTTGAATTGCTCAAGTGGATGATTGTTTGGGAACCTCACCTTCAGAAGGCTGTATCTGTGATTCTTTCTGCTGCCAATGATTCCAACTGGCGAACTAGATCTGCTACATTGACATATCTGCGCACATTCATGTACAGGCACACTTTTACTGTCTCAAGTTCAAAGAAGCAAGAGATTTGGAGAACTGTTGAGAAGTTACTAGTAGACAATCAAATTGAGGTAAGAGAACATGCTGCAGCAGTTTTAGCAGGCTTAATGAAGGGTGGAGATGAAGATCTTGCTAGAGATTTCCGTGATAGAGCTTATAGGGAGGCAAATATTGTACAGAAGAGAAGAAAGTCGAGAAATGCAAGTTCTGGATCATCAATAGCATCTGTTCATGGTGCTGTACTAGCTTTGGTAGCTTCTGTATTATCAGCCCCATATGACATGCCCAGTTGGTTGCCTGATCATGTTACACTACTTGCTCGCTTCAGTGGGGAGCCATCACCCGTGAAATCTACAGTTACTAAAGCAGTTGCAGAGTTCCGGCGGACCCATGCTGATACATGGAATGTTCAGAAAGAATTTTTTACTGAAGAGCAACTTGAGATTCTGGCAGATACATCCTCGTCGTCGTCATATTTTGCTTGA 5448 0.4113 MHLYNAWLPPPVAAQTAGERDSFARVIAAVKSAFRSDDPDSVFSTLKFISVLDLFIKAKSDVSLEDVCNLIQMGLEIFHVSRNKLYAQVRWGNLLVRILNKYRKKISLTIEWRPLYDTLVSTHFTRSTGPEGWRIRQRHFETITSLVQSCRRFFPSGSAFEIWSEFKSLLQNPWHNSSFEGSGFARLFLPTNLDNQDFYTQDWITECIDLWESIPNCQFWNNQWADVIARVVKNYHNVDWECFLPLLFARYLNMFEVPVANGSGSYPFSLDVPRNTRFLFSNKTSTPAKAIAKSIVYLLKRGSSSQKHFEKLINILEQYYHPSNGGRWTYALERFLFHLVFQFQKRLQNEQLGINNSRPTEQHLGESERVFFVNSVLKLIDRGQYSKNEHLSETVAAATSILSYVEPSLVLPFVASRFQMALETMTATHQLKIAVMSVAFVGRSLFYTSVSVSSMKPIDLGGGDEAFIDLVGVSLSNALLGMDANDPPKTLATMQLIGSIFSNLALLDDKIDDLSFMPMIRFSEWLDEFLCRLFSLLLHLEPSSVLNEGLQSSSATGTFLVDDGPYYFCVLEILFGRLSQSLYNQALKKISKFVRTNILPGAVAEVGLLCCACVHSNPEEAVSQLVEPILLSVISSLKGTPRTGFGGGTFDASASSKVRSTISPALEASIDYQLKILSVGITYGGPALLHYKDQFKEAIFLAFDSPSWKVNGAADHLLRSLLGSQIHYYPIDQYKCVLSHPDAVALEEWISTKDFSTDERLIPKWHIPCDEEVHFANELLDIHFKSALDDLLKICQTKIHADQGDEKEHLKVTLLRIESSLQGLFSCLPDFVPDSRNGMVEDSNHMFLIAGATGCTVGSTALREKATEVVHAACKYVLEKKSDDSILLILIIRIIDALGNYGSLEYDEWSSHRQAWKLESAAIIEPPINFIVSSHSKAKKRPRWALIDKAFMHNTWRSSQASYHLYRTSGNFCPSDHVTMLMDDLLSLSLHSYETVRLLAGKSLVKLIKRWPSMISKCVITLTHNLQDLNAKEYAVLGSCSVLASQTVLKHLTTDPKSFSSFILAILSSSHHESLKAQKAINELFVKYNIQFSGVSRSFFRISDKENHTGGLGFSDLVSQIGSMSFDSTGLHWRYNLMANRVLLLLALASQNHPNSSSKILSETAGHFLKNLKSQLPQTRILAISALNTLLKESPYKLSHGEKSAVLEDLQGHVKSSLEGTLTPTFQEEGFFNETLTSLSHVHIITDSETASRGGQGDSSFQSLADKSITRFYFEFSASWPRTPSWISFLGSDTFYSNFARIFKRLVQECGMPVVLALKGAVDEFTIAKERSKQCVAAEALAGVLHSDIDGLSGTWESWLMPQLKNIILAQSVESVSEWASCIRYAVTGKGKYGTRVPLLRQKILDSLMTPLPPTVATTITAKRYTFLAAALIEISPQKMPVAEVQLHNTLLKEVLGNMCHSSAQVREALGVTLSILCSNIRLYHSSRHDNAQDERNNDVDSLMKDESWVQFLTERAAEAVVNIQIATQSDKVVNPVDTNSQNGHLDGDSQDCIKWMETLLYFIISSLKSGRSSYLLDVLVGLLYPVICLQETSNKDLSTLAKVAFELLKWMIVWEPHLQKAVSVILSAANDSNWRTRSATLTYLRTFMYRHTFTVSSSKKQEIWRTVEKLLVDNQIEVREHAAAVLAGLMKGGDEDLARDFRDRAYREANIVQKRRKSRNASSGSSIASVHGAVLALVASVLSAPYDMPSWLPDHVTLLARFSGEPSPVKSTVTKAVAEFRRTHADTWNVQKEFFTEEQLEILADTSSSSSYFA* 1816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0610 1815 SUPERFAMILY ARM repeat 960 1698 IPR016024 -
Gso18g0610 1815 Pfam Proteasome-substrate-size regulator, mid region 310 506 IPR032430 -
Gso18g0610 1815 Pfam Proteasome-substrate-size regulator, mid region 520 824 IPR032430 -
Gso18g0610 1815 Pfam Domain of unknown function (DUF3437) 1730 1815 IPR021843 -
Gso18g0610 1815 PANTHER PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 1 1815 IPR035309 GO:0016504|GO:0070577|GO:0070628
Gso18g0610 1815 Gene3D - 1541 1705 IPR011989 -
Gso18g0610 1815 PANTHER PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 1 1815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0610 Gso-Chr18 6640154 6657930 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0610 K06699 - gmx:100814812 3496.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0610 18 6640154 6657930 Gso8g2781 8 45554812 45571726 GST