Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0380 ATGATATGGTCAAGGCTAAGTAGGAGAACTCATCTCTTGCCATACCTTAGGGCTTTGCAAACAGACTCAATTGAATCCAGGTGCCTATCTATCATTCCTAAAGGATCAAGTTACAAGTTCATTAATCCTAATACCAGCTTCCAACACAATTTCTCTTGTAATATACGGCTATCAAAGTTTAAGCAAGAATTGAGTACAAAACCATTCCATCTGTGTTACCGCTCTTCAGCTTTGGCTTCACAGTATGTTGGAAAGTCATGTTCCATGCCTGGTTTCCGACACTTCTCTTCTCATGCATCCAAAGAACAGAAATCACGAAAGATGCTTTTATACTTGACGGGCTTAGTTTTTGCTATGGTTGGGTGCACATATGCTGCAGTTCCCCTTTACAGGAGATTTTGCCAAGCAACTGGCTATGGGGGAACTGTTACCCGGCGTGAGACTGTTGAAGAAAAGATTGCTCGACATGATAGCAATAATACAGTCACCACAAGGGAAATCGTGGTGCAGTTCAATGCTGATATTGCTGATGGGATGCAATGGAAGTTTGTTCCCACACAGAGAGAGGTTAGGGTCAAGCCTGGTGAAAGTGCCCTTGCATTTTATACTGCCGAAAACAAAAGTTCTACTCCAATAACAGGTGTTTCTACGTATAATGTCACTCCTATGAAGGCTGCAGTGTACTTCAATAAAATTCAATGCTTCTGCTTTGAGGAGCAGCGACTTCTTCCTGGAGAGCAGATTGACATGCCTGTATTCTTTTATATTGACCCGGAATTTGAGACGGATCCTAAAATGAATGGTATCAATAACATTATATTATCATATACCTTCTTCAAGGTTTCTGAGGAATAA 855 0.4105 MIWSRLSRRTHLLPYLRALQTDSIESRCLSIIPKGSSYKFINPNTSFQHNFSCNIRLSKFKQELSTKPFHLCYRSSALASQYVGKSCSMPGFRHFSSHASKEQKSRKMLLYLTGLVFAMVGCTYAAVPLYRRFCQATGYGGTVTRRETVEEKIARHDSNNTVTTREIVVQFNADIADGMQWKFVPTQREVRVKPGESALAFYTAENKSSTPITGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPKMNGINNIILSYTFFKVSEE* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0380 284 Hamap Cytochrome c oxidase assembly protein CtaG [ctaG]. 89 284 IPR007533 GO:0005507
Gso18g0380 284 PANTHER BNAA08G27140D PROTEIN 1 284 - -
Gso18g0380 284 SUPERFAMILY Ctag/Cox11 159 283 IPR023471 -
Gso18g0380 284 Pfam Cytochrome c oxidase assembly protein CtaG/Cox11 126 280 IPR007533 GO:0005507
Gso18g0380 284 Gene3D Ctag/Cox11 156 284 IPR023471 -
Gso18g0380 284 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0380 Gso-Chr18 3734982 3739281 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0380 K02258 - gmx:100820168 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0380 18 3734982 3739281 Gso13g1235 13 27429457 27434151 GST