Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0351 ATGGAAATAAGTATTGCAAGGTCTCATCTCGAAACACAGGGAATATTCTTTTCAAATATTTCAAGAACAATAGGATGGGAAAGCATTAGGAAACTTCCATGTAATGTGGCTGCCCAGGGTTCAAGACGGGATTTTCACAGATTGGCCTCTTCCTGTCAAGCTTTTACTGCAGTGTATCCTAGAAGGTCTTTTATCTGTAGAGCAAATTCTATGCCAATTAGTTTACAGGAATCTGCATCATATGGAGATAATTCTATTGAGGATGAGGATCCATATACAGACTTGGAAGAGGAAGCTTTGGCAAAACCACCTACCAGTGAACAGATAATGACATTGCTTGCTGACACACAGAGAGCAAAACTCACTAAGAAGCTTAGTGAGGCCAACCAGCAAAACCGGTTCCTAAAAAGACAGTTGAATGTAAAGGAGGATGCATTGGTAAAATTCAAAAGTGAACTTGCTGTCATGGAACTTGAAATTCAGGCTTTGGTCAGATTAGCAGAAGAAATAGCTCAATGTGGTATTCCAGAAGGTTCAAGGAAGATCAATGGAAAGTACATTCATTCTCACCTTGTTGCTAGATTAGAAGCTGTAAATGAACTACTGAAGGAACAAATAAAAGATGTCGATGCGGCACAATCGAAGGAGGTTTCTGTATTTTGGGTTGGCATGGCTGAGAGCGTGCAAGTTATGGGCACCTTTGATGGCTGGAGCCAAGGGGAGCACCTTTCACCTGAGTATACTGGTTCTTACACAAGGTTTTCCACTACATTGTTGCTTAGGCCAGGAAGGTATGAAATCAAATTCTTAGTTGATGGTGAATGGAAGCTGTCACCAGAGTTTCCCATTATTGGTGAAGGGTTAACCAAAAATAATTTGTTAGTTGTCGAGTAA 894 0.406 MEISIARSHLETQGIFFSNISRTIGWESIRKLPCNVAAQGSRRDFHRLASSCQAFTAVYPRRSFICRANSMPISLQESASYGDNSIEDEDPYTDLEEEALAKPPTSEQIMTLLADTQRAKLTKKLSEANQQNRFLKRQLNVKEDALVKFKSELAVMELEIQALVRLAEEIAQCGIPEGSRKINGKYIHSHLVARLEAVNELLKEQIKDVDAAQSKEVSVFWVGMAESVQVMGTFDGWSQGEHLSPEYTGSYTRFSTTLLLRPGRYEIKFLVDGEWKLSPEFPIIGEGLTKNNLLVVE* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0351 297 CDD E_set_AMPKbeta_like_N 216 296 - -
Gso18g0351 297 PANTHER PROTEIN PTST, CHLOROPLASTIC 3 297 - -
Gso18g0351 297 Pfam Glycogen recognition site of AMP-activated protein kinase 218 293 IPR032640 -
Gso18g0351 297 SUPERFAMILY E set domains 217 296 IPR014756 -
Gso18g0351 297 Coils Coil 118 145 - -
Gso18g0351 297 Coils Coil 192 215 - -
Gso18g0351 297 Gene3D Immunoglobulins 207 296 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0351 Gso-Chr18 3314423 3320434 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0351 - - gmx:100795997 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0351 18 3314423 3320434 Gso13g1264 13 27915579 27921948 GST