Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0296 ATGAAGCAGGAAATGGAGAAGAGAAAGGGAGGTAGAATTGAAGAAAGTGATGAAGAGAAATGGGTCCATGATGCATCTGTGGATTACAAGGGAAGAATCCCTCTCCGTGCTTCCACGGGTGTATGGAAAGCTTCGCTTTTTGTCCTTGCAATTGAATTTAGTGAAAGGATAGCCCACTTTGGGATATCCAGTAATCTTATCATGTATCTGACTGAAGTGATGCATGAAGACCTAAAGACAGCAACCAATAATGCAAACTTGTGGAAAGGAGCAACAACCTTGTTGCCTATGATTGGGGGATTTCTTGGTGATGCCTACACCGGTCGATTTCGTATGGTAGTCTTTTCTTCCCTCGTATACTTCAAGGGATTAAGCCTCTTGACCATGTCTCAATTCATTCCAAATCTAAAACCATGCAACAATGATATATGTCATCAGCCAAGAAAGGTTCATGAAGTGGTTTTCTTCCTTGCTCTTTACTGTATCGCCTTGGGAACTGGAGGATTCAAACCATGCTTAGAAAGTTTTGGAGGTGATCAATTTGATGGTGACAACCTTGAAGAACGAAAGAAGAAGATGTCTTTCTTCAACTGGTGGACCTTTACATTCAGCATTGCTTTGTTGTTAGCGACAACGGTGGTTGTTTATGTTCAGGACTTCGTTAGCTGGGGAGTTGCTTATCTCATCCTCGCTATGTTCATGGCTCTCACTATCATTGCTTTCTATGTGGGGATACCTTTTTACAGGTACAGAATGAGGCCAAACGCAAATCCTTTCATACCAATTCTACAAGTCCTAATTGCATCCATAAGGAAAAGGAATTTGTCTTGTCCTTCAAATCCTGCTTTATTATGTGAAGTCCCAATGTCAGAGAATTCCCAAGGAAGGCTTCTAAACCATACTAGCAGGCTCAGGTTTCTTGACAAGGCTGCAATAGTTGAAGAAAAGTATATTGAGAAGAAAGCTGGCCCATGGAGATTAGCAACAGTGACAAGAGTGGAGGAGACAAAGCTTATTCTAAACGTTGTTCCGATATGGCTAACTTCATTAATGATTGGTGTATGCATAGCACAAGGTTCGACACTCTTTGTCAAACAAGCAGCTGCTATGAACTTAAAGATAAGCGACAACTTCAAAATTCCACCAGCTTCCATGGCGTCCCTTTCAGCCTTTGGCACCATAATATCTGTCCCAATATATGATAGAATTATTGTTCCAATTCTAAGGAAAGTCAGAGGTAACGAAAGAGGCATCAGCATCCTTGGGAGGATTGGCATTGGCTTAATATTCTTAGTCATACTCATGGTTGTTGCTGCCTTAGTAGAAAATATGAGATTAAGAATGCCTGGTCATGAGACAATGAGTGTGATGTGGTTGATACCCCAATACTTGATCCTTGGCATTGGAAATTCATTTTATCTAATTGCTTTGCAAGAGTATTTCTATGATGAAGTTCCTGACTCAATGAGAAGCGTAGGAATGGCTTTGTATCTTAGTGTGATTGGAATAGGATTCTTCTTAAGCAGCTTTCTAATAATAATTGTGGACCATGTCACAGGGAAGAATGGCAAAGGTTGGATTGCCAAGGATGTAAACTCAAGTCGTCTAGATAAGTTTTATTGGATGTTGGCTGTCATAAGGGTGCGATGTATGGATGGAAAGAAATGGGTGCATGATGCATCTGTGGATTATAAGGGCAGAGTTCCTCTCCGTGCTTCCACAGGTGTATGGAAAGCGTCGCTTTTTGTCCTTGCAATTGAATTTAGTGAAAGGATATGCCACTTTGGGATAGCCACTAATCTTATCATGTACCTGACTAAAGTAATGCATGAAGATCTCAAAACAGCGACCAAGAATGTAAACTACTGGGTAGGAGCAACAACTTTGATGCCTCTAATTGGAGGATTTGTTGCTGATGCCTACACTGGTCGATTTCGTATGGTCCTCTTTTCTTCCCTCTTATACCTCAAGGGATTAAGCCTCTTGACCATGTCTCAATTCATTCCAAGTCTAAAACCATGCAACAATGAGATATGCCATTGGCCAAGGAAGGTTCATGAAGTGGTTTTCTTCCTTGCCCTTTACTGTGTCGCCTTGGGAACTGGAGGATTCAAACCGTGCTTACAAAGCTTTGGAGCAGATCAATTTGATGATGACCACCTTGAAGAAAGGAAGAAGAAGATGTCATTCTTCAACTGGTGGAATTTTACACTTTGCATGGCAATGCTGCTTGGGGCAACAGTGATTGTTTATGTTCAAGACTTTGTCAGCTGGGGAGTATCTTATCTCATCCTCAGCATGTTCATGGCTCTCACTATCATTGCTTTCTATGAGGGGAAGCGTTTTTACAGGTACAGGAGCACAGAAGGTAACCCTTTCATGCTAATTCTACAAGTACTAATTGCAGCAATAAGGAAAAGCAACTTGTCCTGTCCTTCAAATCCCGATTCATTGTATGAATTCCCAAAGTCAGAGAAGTCACAAGGAAGGCTTCTAAGCCATACTTGCAGGCTCAGGTTTCTTGACAAGGCGGAAATAGTTGAAGGGAAGTATACTGAGCATAGAGACCAGAATCCATGGAGATTAGCAACAGTGACAAGAGTGGAGGAGACAAAGCTTATTCTGAATGTTATTCCCATATGGCTAACTTCATTAATAATTGGTGTATGTATAGCGCAAGGCTCGACACTCTTTGTCAATCAAGCAGCTGCTATGAACTTAAAGATAAGCAACAGCTTCAAAATCCCACCAGCTTCCATGACATCTGTTTCAGCTATTAGCCCAATAATAGCTATCCCAATATATGATAAGATTATAGTTCCAATTATGAGGAAAGTCAAAGGTAACGAAAGGGGCATCAGCGTCCTTTGGAGGGTTGGCATTGGCTTAGCATTCTTAGTCATAGCCATGGTGGTTGCTGCCTTAGTAGAAACAAAGAGATTAAGAATGGTTGAACATGATGAAGTGATAACAGTAGGGGGGACTAGGCATGAGACAATGAGTGTGTTGTGGTTGATACCCCAATACTTGATCCTTGGAATTGGAGCAGATTCATTGTCTCTAATTGGTTTGCAAGAGTATTTCTATGACCAAGTTCCTGACTCAGTGAGAAGCTTAGGAGTGGGTTTGTATCTTAGTGTGGTTGGAGTAGGATTCTTCTTAAGCAGTTTTCTGATCATCACTGTGGATCATGTCACGGGGAAGAATGGAAAAAGTTGGATTGCGAAGGATATAAATTCAAGTCGTCTAGATAAATTTTATTGGATGTTGGCTGTCATAAATGCTTTCAATTTGTGTTTCTTTCTATTCTTGGCAAAGGGGTACACTTATAAAACCGTGCAAAGGAAAACTAGGGAAAATTGTAGTGATGGGGTGGAGACAATGGAATCATGA 3393 0.4106 MKQEMEKRKGGRIEESDEEKWVHDASVDYKGRIPLRASTGVWKASLFVLAIEFSERIAHFGISSNLIMYLTEVMHEDLKTATNNANLWKGATTLLPMIGGFLGDAYTGRFRMVVFSSLVYFKGLSLLTMSQFIPNLKPCNNDICHQPRKVHEVVFFLALYCIALGTGGFKPCLESFGGDQFDGDNLEERKKKMSFFNWWTFTFSIALLLATTVVVYVQDFVSWGVAYLILAMFMALTIIAFYVGIPFYRYRMRPNANPFIPILQVLIASIRKRNLSCPSNPALLCEVPMSENSQGRLLNHTSRLRFLDKAAIVEEKYIEKKAGPWRLATVTRVEETKLILNVVPIWLTSLMIGVCIAQGSTLFVKQAAAMNLKISDNFKIPPASMASLSAFGTIISVPIYDRIIVPILRKVRGNERGISILGRIGIGLIFLVILMVVAALVENMRLRMPGHETMSVMWLIPQYLILGIGNSFYLIALQEYFYDEVPDSMRSVGMALYLSVIGIGFFLSSFLIIIVDHVTGKNGKGWIAKDVNSSRLDKFYWMLAVIRVRCMDGKKWVHDASVDYKGRVPLRASTGVWKASLFVLAIEFSERICHFGIATNLIMYLTKVMHEDLKTATKNVNYWVGATTLMPLIGGFVADAYTGRFRMVLFSSLLYLKGLSLLTMSQFIPSLKPCNNEICHWPRKVHEVVFFLALYCVALGTGGFKPCLQSFGADQFDDDHLEERKKKMSFFNWWNFTLCMAMLLGATVIVYVQDFVSWGVSYLILSMFMALTIIAFYEGKRFYRYRSTEGNPFMLILQVLIAAIRKSNLSCPSNPDSLYEFPKSEKSQGRLLSHTCRLRFLDKAEIVEGKYTEHRDQNPWRLATVTRVEETKLILNVIPIWLTSLIIGVCIAQGSTLFVNQAAAMNLKISNSFKIPPASMTSVSAISPIIAIPIYDKIIVPIMRKVKGNERGISVLWRVGIGLAFLVIAMVVAALVETKRLRMVEHDEVITVGGTRHETMSVLWLIPQYLILGIGADSLSLIGLQEYFYDQVPDSVRSLGVGLYLSVVGVGFFLSSFLIITVDHVTGKNGKSWIAKDINSSRLDKFYWMLAVINAFNLCFFLFLAKGYTYKTVQRKTRENCSDGVETMES* 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0296 1130 SUPERFAMILY MFS general substrate transporter 575 1108 IPR036259 -
Gso18g0296 1130 SUPERFAMILY MFS general substrate transporter 38 520 IPR036259 -
Gso18g0296 1130 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 562 1115 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso18g0296 1130 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 27 548 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso18g0296 1130 Pfam POT family 110 523 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso18g0296 1130 Pfam POT family 645 1070 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso18g0296 1130 PANTHER OS03G0204700 PROTEIN 27 548 - -
Gso18g0296 1130 PANTHER OS03G0204700 PROTEIN 562 1115 - -
Gso18g0296 1130 Gene3D MFS general substrate transporter like domains 13 550 IPR036259 -
Gso18g0296 1130 Gene3D MFS general substrate transporter like domains 551 1117 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0296 Gso-Chr18 2679590 2690545 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0296 16 546 Organic Solute Cotransporters AT3G53960 52.952 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0296 - K14638 vun:114191162 1690.24