Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0254 ATGGCGAGTAGCAGCAGCAACACTCCGAAGGAAAGCGTTGTTGTCGACTGCGGAAGGCGTCGAACCTCTTGCGGCTATTGCAGATCCTCTCGTCACAATAGCATCTCTCATGGCATGTGGGCACATAGCCTTACTGTGGATGACTACCAAGATCTTCTTGATCGTGGCTGGAGAAGGTCTGGATGTTTTCTTTATAAACCAGAGATGGAAAGGACATGCTGCCCTTCTTATACAATTCGCTTGAAAGCAAGTGACTTTGTTCCTTCTAAGGAGCAACTTCGTGTATCTAGACGAATGCAAAGGTTTTTAGATGGAACCTTGGATGTAAAAAAAGTTGATGTTATGGAGGACCCAACCAAATCGGGAATCTTCACTAGACCTATGTCAGAAGAATCCTTAGCTGCTGGCAGTGAAAACAAGGATGAAGTTGAAAAATCTTTGCATTATTTATCAAACCAAATTGATAATGTTATACACATCCTCATTGAGAAGGGGGAATTTCCCTCTGGTATTCAATTACCAAATGCTTCAGTAAAAAGAGTTTCACAGGGAAAAAGAAAGTTACTAGTCAATGGATCAGAAGATCTCTTATATAGTAGCAATATAGCCTTTCAAATTGCAGCATCTATAAAACGAGCACAATCATGTGACAAGGTTGTCGATGATTCCAAACCAGCAAGAGTCTGTGAAAAGGAGAATGATTCATCTCCTAAAATTATTGCAGAAAAGCTAGTAGCTTCTTTAGATCCAACTGTGAAAAATTCTGATTTGTCTATCAGGGCTTGCAATGGACATATCAATTTTTATGCTTCTAGTAAGCAAGTGTCCCTGAACAGAAGTGTTCAAAATGCTCCAGTTCCTAAAATTTCTAGAATGAAGCATGACAGTGGAGGAAATTGTTTGATTGGTCAGGTAAAAAGGCAAAAGCTTGAGATCCGTTTAAACAGATCCAGTTTTGATCCAGAAGAATTTGCTTTGTACAGAAGATATCAGCTCAAAGTACATAATGATAAACCACAAAATGTCACAGAGAACTCATATCGTAGGTTTTTGGTTGATACTCCATTAATACAAGTTTCTCCCACTGGTGATAGCACAGTTCCTCCTTGTGGTTTTGGCTCTTTCCATCAACAATATCTAATAGACGGCCAGTTAGTGGCAGTTGGTGTTATAGATATCCTTCCTAAATGTTTGTCAAGTAAATATTTGTTCTGGGATCCAGACTTTGCCTTTCTATCACTAGGCAAGTACTCGGCTTTTCAAGAAATAGGTTGGGTGAAAGAAAACCAGGTTTATTGTCCTAGTCTACAATACTATTATCTTGGCTACTATATTCACTCTTGCAGCAAGATGAGATACAAAGCTGCATATCGTCCTTCAGAGCTTTTATGCCCTCTTCGCTATCAGTGGGTTCCATTTGACATTGCAAGGCCTCTGCTTGACAGAAAACCTTATGTTGTCTTATCAGATTCTTCCATTTTACAAAATGGAGAGTCATCCCTACCTCAAACTACGGAAGATGTAATGAGAAGGGGTTTTGATGATGTTGGCCAAGAAGATGCAAATGATGTTCCAATGCTTGATGATGAAGAAATGGTTGAGTCTGAATCAGAATGCTCTGATGATGAACCTGACCTAGAAACCACTTCAGATGATGATCCAGAAATTGCTGATGTCAGCAAGGTTTTGCTAGGGATAAAGGGATCTCATGTGAAATACAAGGATCTGCGGGTTGTCTTTGGTCCTGAGCAGCAGAGTTACTTGGAGTCACAATTGCGGAGATACAGGAAGGTTGTGGGTCCATTGCTATCCGAGCGAATCGTCTATTCGCTCGGATAA 1839 0.4029 MASSSSNTPKESVVVDCGRRRTSCGYCRSSRHNSISHGMWAHSLTVDDYQDLLDRGWRRSGCFLYKPEMERTCCPSYTIRLKASDFVPSKEQLRVSRRMQRFLDGTLDVKKVDVMEDPTKSGIFTRPMSEESLAAGSENKDEVEKSLHYLSNQIDNVIHILIEKGEFPSGIQLPNASVKRVSQGKRKLLVNGSEDLLYSSNIAFQIAASIKRAQSCDKVVDDSKPARVCEKENDSSPKIIAEKLVASLDPTVKNSDLSIRACNGHINFYASSKQVSLNRSVQNAPVPKISRMKHDSGGNCLIGQVKRQKLEIRLNRSSFDPEEFALYRRYQLKVHNDKPQNVTENSYRRFLVDTPLIQVSPTGDSTVPPCGFGSFHQQYLIDGQLVAVGVIDILPKCLSSKYLFWDPDFAFLSLGKYSAFQEIGWVKENQVYCPSLQYYYLGYYIHSCSKMRYKAAYRPSELLCPLRYQWVPFDIARPLLDRKPYVVLSDSSILQNGESSLPQTTEDVMRRGFDDVGQEDANDVPMLDDEEMVESESECSDDEPDLETTSDDDPEIADVSKVLLGIKGSHVKYKDLRVVFGPEQQSYLESQLRRYRKVVGPLLSERIVYSLG* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0254 612 MobiDBLite consensus disorder prediction 516 554 - -
Gso18g0254 612 PANTHER ARGININE-TRNA-PROTEIN TRANSFERASE 1 4 611 IPR030700 -
Gso18g0254 612 Pfam Arginine-tRNA-protein transferase, C terminus 322 464 IPR007472 GO:0004057|GO:0016598
Gso18g0254 612 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 318 477 IPR016181 -
Gso18g0254 612 PIRSF ATE1_euk 2 612 IPR017137 GO:0004057|GO:0016598
Gso18g0254 612 MobiDBLite consensus disorder prediction 521 553 - -
Gso18g0254 612 Pfam Arginine-tRNA-protein transferase, N terminus 23 92 IPR007471 GO:0004057|GO:0016598
Gso18g0254 612 PANTHER ARGINYL-TRNA--PROTEIN TRANSFERASE 2 4 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0254 Gso-Chr18 2216607 2221724 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0254 K00685 - gmx:100780234 1221.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0254 18 2216607 2221724 Gso18g0254 18 2216607 2221724 ECH
Gso18g0254 18 2216607 2221724 Gso13g1363 13 29143457 29148547 GST