Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0249 ATGGCTTGGTTATGGCGCGCAGGTGCCAAGCTATCTCTTGTGGCCTCCGCCGTGGGCGGTGGCGCCACGGCGGCGCTTATTGCCACCTCCGACGACCCCGAAATGGCGCTCAAGCTTTTCGCCACCGTCCCCCATCGCCTCTTCCGTGGCGCCGCCACCGCCGCCAACATTGCTTTCGATTATGAATATTCACTGCGGGGATTCCCGGAAGGGAGTAGTGAGAGGGAGAGAATCAAGCATGAAGTTCACCTTCGGTCTGCTCAAAAACTTCAAGACCTATGTTTCAAGAATGGAGGGGTTTATATAAAGCTTGGGCAACATCTTGGGCAGTTGGAATATTTGGTTCCTGAGGAATATGTTCAGACAATGAGGGAGTCTATGCTAAATAGATGTCCAGTTTCTTCGTATGAGCAAGTATGCAATGTATTCAAGAAAGAGCTTGGAGACACCCCAGATAAAATATTTTCCGAGTTCGATCCAGTCCCTATAGCAAGTGCTTCCCTGGCTCAAGTTCATGTAGCTCGCACGCATGACGGCCAAAAAGTTGCCGTGAAGGTTCAGCATACTCACATGACTGATACTGCAGCTGCCGATCATGCCACTGTGGAATTGGTTGTGAACACATTGCATAGATTTTTTCCTAGTTTTGATTATAGGTGGTTGATTGATGAGATTAGTGAAAGTTTGCCCAAGGAATTAGATTTTTTAACTGAGGCAAAGAACAGTGAGAGGTGTGTGGAGAACTTCCACAAGTTGTCTCCTCATATTGCGAATTATGTATATGCACCAAACGTATATTGGAATTTGAGTACCTCAAAGCTTCTGACAATGGAATTCATGGATGGTGCTTATGTAAATGATGTAAAGACCATTCGGAAACTTGGGATCAACCTGCATGAACTTTCAACATTGGTTAGTCAAACTTTTGCTGAAATGATGTTCAAGCATGGGTTTGTACACTGTGATCCACATGCTGCTAACTTATTGGTTCGCCCATTGCCTTCCAGCAAAGCTAGCATTTGGGGCAGGAGAAAACCACAGTTGATCCTTTTAGACCACGGACTCTATAAAGAGCTTGACTTCCAAACAAGAACTAATTATGCTTCACTATGGAAGGCATTGGTATTTGCTGATGCTAATGCAATCAAGGAATACAGTACAAAGTTGGGAGCTGGGGAGGATTTATATGCACTTTTTGCTGGAGTTCTGACGATGAGGCCATGGAATAGAGTTGTTGATCCATCTATGGATCATTTAGTAATACAGGGAAATGAGAGTGATCGATTAGAACTGCAGATGTATGCTTCTCAGTATTTCCATCAAATCTCGGAGCTTCTAAGGAGATTACCACGAGTGATTCTTCTAATGCTGAAGACAAATGACTGTTTACGAGCAGTCAATAATTCTCTGTTGCAGGGATCATCTTTGGAGACATTTTTTGTAATTGGAAAGGTTTCTTCGGAGGCTGTCATTGAGGCAAAGATGTTGCAAAGCAAATCACTTTTAACTTGGCTAAACATTAAATTGGATAAGATTTTGCTGGAAGTACGACTTTGGGGAATGCAGGTGGCCTTGTGGCTTTTACAACTAAGAAAATCTTTGTCTTGGTATAACCAAGCATTATAG 1626 0.436 MAWLWRAGAKLSLVASAVGGGATAALIATSDDPEMALKLFATVPHRLFRGAATAANIAFDYEYSLRGFPEGSSERERIKHEVHLRSAQKLQDLCFKNGGVYIKLGQHLGQLEYLVPEEYVQTMRESMLNRCPVSSYEQVCNVFKKELGDTPDKIFSEFDPVPIASASLAQVHVARTHDGQKVAVKVQHTHMTDTAAADHATVELVVNTLHRFFPSFDYRWLIDEISESLPKELDFLTEAKNSERCVENFHKLSPHIANYVYAPNVYWNLSTSKLLTMEFMDGAYVNDVKTIRKLGINLHELSTLVSQTFAEMMFKHGFVHCDPHAANLLVRPLPSSKASIWGRRKPQLILLDHGLYKELDFQTRTNYASLWKALVFADANAIKEYSTKLGAGEDLYALFAGVLTMRPWNRVVDPSMDHLVIQGNESDRLELQMYASQYFHQISELLRRLPRVILLMLKTNDCLRAVNNSLLQGSSLETFFVIGKVSSEAVIEAKMLQSKSLLTWLNIKLDKILLEVRLWGMQVALWLLQLRKSLSWYNQAL* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0249 541 PANTHER ABC1 FAMILY PROTEIN 7 532 - -
Gso18g0249 541 SUPERFAMILY Protein kinase-like (PK-like) 129 331 IPR011009 -
Gso18g0249 541 PANTHER BNAC04G05270D PROTEIN 7 532 - -
Gso18g0249 541 CDD ADCK1-like 126 390 IPR045307 -
Gso18g0249 541 Pfam ABC1 atypical kinase-like domain 127 385 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0249 Gso-Chr18 2155069 2161767 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0249 K08869 - gmx:100808050 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0249 18 2155069 2161767 Gso18g0249 18 2155069 2161767 ECH
Gso18g0249 18 2155069 2161767 Gso13g1369 13 29220093 29226613 GST