Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0224 ATGCTTCACTCCACTTCTCTCCTTCCCCATAATAACCGCTTCGTCTTCTCCTTCCGCTCCAAACCTTCTTTTTTTCATTCCCACTCTCTCTCTTTCTCCAAATTTCTCTCTCTTCCATCTTCTTCTCAATCCTCATGTTGCCACGTGTCTCGAATCTCCACCGAGACCTTGGAGGTCTCGCCGCCGCCGCCTCCCGACTTCAACTTCCGCCGCGAAATCGCGCGCCTCGCCGACCTCCGCGACAGGCTCTCCGCGTGCTCTACTTTAAACGAGAAGCTCCGCGTGATCGACGCCGACTCCAGAGTGAAGCGCTTCTTCCGTTCCCGCCGCGGCCTCGCTGGGGTTTTGGCATCGCTGCAATTGAGCTCCGACCAACTGTTCCTGCTCAAGTGCGTGGTTGCCGCCGGACAAGAGCACGTGCTGTGTTTGGGCGAAACGGAATCGTTGGAATCCTCCGTCGCCACGAGTGCAGTGAAGAGCGCGCTTTACACTCTGGCGGATATGATTGAGAATATGGATTCCTTTAACGGCAATGGCGGAGCGGGTTTTGGGATGGCTTTGGGGGATCACGAGATTGCGGAGTTGAACAATTTGTTAGAGATTTTGGCAGAAATTGAGCGATTCTATGACTGTATTGGAGGAATTGTTGGGTATCAGATAACAGTACTGGAACTTCTTGTACAAAAATTGTTCGAGATGCAGAATATAAGCTGGGCCCACCAGAGGCATGACGTGAAAGAATGCCAAATTTTGGGAATTAATGCACCTAATGGGCTTAACCTTTCTGAAGACACAGAGTATGCATCTCAAGCAGCTCTATGGGGTATAGAGGGTTTGCCAGACCTAGGTGAAATTTATCCGTTGGGAGGCTCTGCCGACAGACTTGGTTTGGTTGATCCTAACACAGGTGAATGCCTGCCTGCTGCAATGCTACCATATTGTGGAAGGACTTTGTTGGAAGGTCTTATAAGAGATCTTCAGGCTAGAGAATTCTTGTACTTCAAGTTATATGGGAAACAATGCATCACACCTGTTGCAATAATGACAAGTTCCGCAAAGAACAACCACAAACATGTCACCTCTCTGTGTGAAAGACTTTCATGGTTTGGAAGAGGTCGATCAACTTTCCAATTTTTTGAACAGCCTCTTGTTCCAGTTGTTGGTGCAGAAGAAGGCCAGTGGCTGGTCACCAAACCATTCAGTCCCTTGAGTAAGCCTGGTGGTCATGGTGTCATATGGAAACTTGCTCATGACAAAGGCATCTTCACATGGTTTTACTGTCAAGGAAGAAAAGGTGCAACTGTGCGCCAAGTCAGTAATGTGGTGGCAGCCACAGATTTAACCCTCCTAGCCTTAGCTGGGATTGGCTTACGTCAAGGAAAGAAACTGGGATTTGCATCTTGTAAGCGGATCTTGGGTGCCACAGAAGGAGTTAATGTGCTCATGGAGAAGAAAAGTCTTGATGGGAACTGGGAATATGGTGTGTCTTGTATTGAATACACTGAATTTGACAAGTTTGGAATTACTACCGGACCTCTTGCTCCAAAAGGTTTGCAGACAGAGTTCCCAGCCAATACAAACATCTTATATATTGATTTGCCTTCTGCGGAGCTAGTTGGATCAAGTAAGAGTGAAACTAGTTTACCTGGAATGGTGCTAAATACTAGAAAGCCAATAGTTTACACAGATCAGTTTGGAAGACGTCATAGTGTCTCTGGTGGTAGACTTGAGTGCACAATGCAAAATATAGCTGACAATTATTCCAATTCATATTCATCCAGATGTTATAATGATGTGGAAGATAAGCTAGATACATATATTGTATACAATGAAAGAAGAAGGGTTACCTCCTCTGCTAAGAAAAAAAGAAGACATGGAGACAAGTCTTTACATCAGACACCTGATGGCGCTCTATTAGATATCTTACGAAATGCTCATGATCTTCTTTCACAATGTGATATAAGACTTCCTGAGATTGAAGCTAACGAGAACTATGTTGATTCGGGACCACCATTTCTCATCCTTCTGCATCCTGCTCTCGGTCCTCTTTGGGAAGTCACTAAGCAAAAATTTTATGGTGGTTCCATATCAGAGGGCTCCGAGTTACAAATAGAGGTTGCAGAGTTTTTCTGGAGGAATGTTCAGCTCAATGGAAGCCTGATCATAATATCTGAGAATGTTATGGGCTCAATGAAGATTAATGAGAACGGTGAATCCATACTACATTATGGCCAAAGGTGTGGAAGATGCAAATTGCAAAATGTCAAGGTATTGAACAAGGGAATTGATTGGACTTGCGGTGAAAACATATACTGGAAACACGATGTGCAGCGATCTGAGGTGCTGCAGATCATACTGCATGGAAATGCTGAATTTGAGGCTACTGATGTTGTCTTACAGGGAAATCATGTGTTTGAAGTTCCAGATGGCTACAAACTGAAAATCACGCCAGGAAGCCCAGGTTTAGCAATCAAGTTGGATCCAATTGATCAAGATATGATGGAGAGTGGAAGCTGGCACTGGGATTACAAGATAGAAGGTTCTCACATTCAGCTAGAATTAGTAGAATCATAA 2574 0.4491 MLHSTSLLPHNNRFVFSFRSKPSFFHSHSLSFSKFLSLPSSSQSSCCHVSRISTETLEVSPPPPPDFNFRREIARLADLRDRLSACSTLNEKLRVIDADSRVKRFFRSRRGLAGVLASLQLSSDQLFLLKCVVAAGQEHVLCLGETESLESSVATSAVKSALYTLADMIENMDSFNGNGGAGFGMALGDHEIAELNNLLEILAEIERFYDCIGGIVGYQITVLELLVQKLFEMQNISWAHQRHDVKECQILGINAPNGLNLSEDTEYASQAALWGIEGLPDLGEIYPLGGSADRLGLVDPNTGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHKHVTSLCERLSWFGRGRSTFQFFEQPLVPVVGAEEGQWLVTKPFSPLSKPGGHGVIWKLAHDKGIFTWFYCQGRKGATVRQVSNVVAATDLTLLALAGIGLRQGKKLGFASCKRILGATEGVNVLMEKKSLDGNWEYGVSCIEYTEFDKFGITTGPLAPKGLQTEFPANTNILYIDLPSAELVGSSKSETSLPGMVLNTRKPIVYTDQFGRRHSVSGGRLECTMQNIADNYSNSYSSRCYNDVEDKLDTYIVYNERRRVTSSAKKKRRHGDKSLHQTPDGALLDILRNAHDLLSQCDIRLPEIEANENYVDSGPPFLILLHPALGPLWEVTKQKFYGGSISEGSELQIEVAEFFWRNVQLNGSLIIISENVMGSMKINENGESILHYGQRCGRCKLQNVKVLNKGIDWTCGENIYWKHDVQRSEVLQIILHGNAEFEATDVVLQGNHVFEVPDGYKLKITPGSPGLAIKLDPIDQDMMESGSWHWDYKIEGSHIQLELVES* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0224 857 SUPERFAMILY Nucleotide-diphospho-sugar transferases 126 727 IPR029044 -
Gso18g0224 857 PANTHER UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 3, CHLOROPLASTIC 26 851 - -
Gso18g0224 857 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 183 641 IPR029044 -
Gso18g0224 857 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 26 851 IPR039741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0224 Gso-Chr18 1919921 1928458 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0224 K22920 - gmx:100788781 1641.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0224 18 1919921 1928458 Gso18g0224 18 1919921 1928458 ECH