Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0188 ATGGAAGCCAAAGCAGATTACACCCAAGATGGCACTGTTGATTTCCGTGGCCAGCCTGCAGTTTCATCTAAAACTGGCAAATGGAAGGCTTGCGCTTTTCTTGTTGGCTATGAAGCATTTGAAAGGATGGCCTTCTATGGAGTGGCTTCGAACTTAGTGAATTACCTTACAACCCAACTTCATGAAGATACTGTTTCATCAGTGAGGAATGTGAATAACTGGTCAGGATCTGTGTGGATAACGCCAATTCTTGGGGCTTACGTAGCAGATTCTTATTTGGGTCGATTCTGGACTTTCACTCTCTCATCTCTCGTTTATGTCTTGGGGATGACTCTTCTCACAGTAGCCGTGTCACTCAAGAGCCTGAGGCCAACATGCACCAATGGCATATGCAACAAGGCTTCAACCTCACAAATTGCATTTTTTTACACAGCCCTTTACACTATGGCAATTGGGGCTGGGGGAACAAAGCCTAACATCTCAACTTTTGGTGCTGACCAATTTGATGACTTCAATCCCAATGAGAAAGAGCTAAAGGCCTCATTCTTCAACTGGTGGATGTTTACCTCATTCTTGGGTGCTTTGATTGCCACTTTAGGATTGGTGTACATTCAAGAGAATTTGGGGTGGGGACTTGGGTATGGGATCCCCACCGCTGGTCTTCTATTGTCTTTGGTCATTTTCTATATAGGCACACCAATATATCGCCACAAAGTAAGCACAACCAAAACTCCTGCTAGGGACATAATTCGTGTGCCAATTGCAGCCTTCAGGAATAGAAAACTCCAACTCCCAATTAACCCCTCGGATCTTTATGAGCACAACCTCCAACATTATGTTAATAGTGGGAAACGCCAAGTCTATCACACTCCAACTCTGAGGTTTTTGGACAAGGCTGCTATTAAAGAAGTCAGTGCTGGCTCCACAAGAGTACCATTGACAGTATCCCAAGTGGAAGGAGCAAAGCTTATCTTTGGCATGGCCCTTGTATGGCTAGTGACACTGATTCCAAGCACCATTTGGGCACAAATCAACACTCTTTTTGTGAAACAAGGCACCACTTTGGACAGAAACCTTGGCCCTCATTTTAAAATTCCATCAGCCTCTCTTGGAAGCTTTGTGACACTCTCCATGCTTCTCTCGGTGCCAATGTATGACCGGTTTTTCGTGCCGTTCATGCGCCAGAAAACCGGCCACCCTAGAGGAATCACATTGCTTCAAAGGCTTGGGATTGGATTTTCAATCCAGATCATAGCCATTGCAATTGCCTATGTAGTAGAAGTTAGAAGAATGCATGTCATAGGAGCAAACCATGTAGCTAGTCCTAAAGATATTGTCCCTATGAGTATATTTTGGCTGTTGCCTCAGTATGTACTAATAGGAATAGCAGATGTGTTCAATGCCATTGGATTGCTAGAATTCTTCTATGATCAATCCCCTGAAGACATGCAAAGTCTTGGAACTACATTCTTCACTAGTGGGATCGGTGTTGGGAACTTCTTGAACAGCTTTTTGGTGACAATGGTTGATAAAATAACAGGAAGGGGTGACAAAAAGAGCTGGATAGGGGACAACTTGAATGATTGTCACTTGGACTACTATTATGGGTTTTTGTTGGTCATGTCAAGTGTCAATATGGTGGTTTTTCTTTGGGTTTCAAGTAGATACATTTATAAGAGGGAATCAATAAGGGTCAAGGAGGGTCTTTGTGTTCAAATGGAGGGAGGAAACCCAACTTTGGACGCCTCTCTTGGTTTACAAGTGTGA 1767 0.4358 MEAKADYTQDGTVDFRGQPAVSSKTGKWKACAFLVGYEAFERMAFYGVASNLVNYLTTQLHEDTVSSVRNVNNWSGSVWITPILGAYVADSYLGRFWTFTLSSLVYVLGMTLLTVAVSLKSLRPTCTNGICNKASTSQIAFFYTALYTMAIGAGGTKPNISTFGADQFDDFNPNEKELKASFFNWWMFTSFLGALIATLGLVYIQENLGWGLGYGIPTAGLLLSLVIFYIGTPIYRHKVSTTKTPARDIIRVPIAAFRNRKLQLPINPSDLYEHNLQHYVNSGKRQVYHTPTLRFLDKAAIKEVSAGSTRVPLTVSQVEGAKLIFGMALVWLVTLIPSTIWAQINTLFVKQGTTLDRNLGPHFKIPSASLGSFVTLSMLLSVPMYDRFFVPFMRQKTGHPRGITLLQRLGIGFSIQIIAIAIAYVVEVRRMHVIGANHVASPKDIVPMSIFWLLPQYVLIGIADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTMVDKITGRGDKKSWIGDNLNDCHLDYYYGFLLVMSSVNMVVFLWVSSRYIYKRESIRVKEGLCVQMEGGNPTLDASLGLQV* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0188 588 PANTHER PROTEIN NRT1/ PTR FAMILY 5.1 12 566 - -
Gso18g0188 588 SUPERFAMILY MFS general substrate transporter 21 553 IPR036259 -
Gso18g0188 588 Pfam POT family 96 522 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso18g0188 588 Gene3D MFS general substrate transporter like domains 1 565 IPR036259 -
Gso18g0188 588 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 12 566 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso18g0188 588 CDD MFS_NPF5 28 558 IPR044739 GO:0042937|GO:0042938|GO:0071916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0188 Gso-Chr18 1640409 1645741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0188 1 583 Organic Solute Cotransporters AT2G40460 72.526 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0188 - - gmx:100803784 1162.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0188 18 1640409 1645741 Gso18g0188 18 1640409 1645741 ECH
Gso18g0188 18 1640409 1645741 Gso13g1430 13 29786803 29792285 GST