Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0133 ATGCTGATTTGTATCCGTCCGATCAATCTCCAACGCCTTCATCAGCACGCTATATATATCCCTATCATTCCTAACAATTTGAACCTTTGCATTCTATTCATTCAAGATTCAGCAAGTGCGTTTCGGAAGCAGAGACCGAAATACTTCGAGATGGCCCGTACAAAGCAAACTGCTCGTAAGTCAACTGGAGGAAAAGCTCCCAGGAAGCAGCTTGCAACCAAGGCTGCACGTAAGTCTGCTCCAACAACTGGTGGTGTGAAGAAGCCTCATCGTTATCGCCCTGGAACTGTTGCTCTTCGTGAGATTAGGAAATACCAGAAGAGCACTGAGCTCCTAATCAGGAAGCTTCCTTTCCAGAGGTTGGTTCGTGAAATTGCCCAGGATTTCAAGACTGATCTGCGTTTCCAGAGCCATGCTGTGCTTGCATTGCAAGAGGCTGCTGAGGCATACCTTGTTGGGCTCTTTGAGGACACTAACTTGTGTGCCATTCACGCCAAGCGTGTGACTATTATGCCCAAGGATATTCAGCTGGCAAGAAGGATTCGTGGTGAGCGTGCTTGA 561 0.4777 MLICIRPINLQRLHQHAIYIPIIPNNLNLCILFIQDSASAFRKQRPKYFEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0133 186 MobiDBLite consensus disorder prediction 54 91 - -
Gso18g0133 186 PANTHER - 33 186 - -
Gso18g0133 186 Gene3D Histone, subunit A 52 186 IPR009072 GO:0046982
Gso18g0133 186 SMART h35 84 186 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso18g0133 186 ProSitePatterns Histone H3 signature 1. 65 71 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso18g0133 186 PANTHER HISTONE H3 33 186 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso18g0133 186 PRINTS Histone H3 signature 53 67 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso18g0133 186 PRINTS Histone H3 signature 67 81 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso18g0133 186 PRINTS Histone H3 signature 84 105 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso18g0133 186 PRINTS Histone H3 signature 108 125 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso18g0133 186 PRINTS Histone H3 signature 130 148 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso18g0133 186 PRINTS Histone H3 signature 148 164 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso18g0133 186 PRINTS Histone H3 signature 164 185 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso18g0133 186 SUPERFAMILY Histone-fold 52 183 IPR009072 GO:0046982
Gso18g0133 186 ProSitePatterns Histone H3 signature 2. 117 125 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso18g0133 186 Pfam Core histone H2A/H2B/H3/H4 51 182 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0133 Gso-Chr18 1140404 1142082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0133 K11253 - gmx:100783277 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0133 18 1140404 1142082 Gso13g1486 13 30350087 30351667 GST