Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0126 ATGGGACTTGTTTTTACCAAATGGGCATGTGCATTCCTACTATGCTACTATCTCATAACTTCTGAGGTATATTCAGTGGAGGGCTTGCATGACGGTTCTAAAGCGAGAGATGTGAACTTAGGAGGGTGGCTGGTTATCGAAGGTTGGATGATCAAGCCTTCACTCTTTGGTGGCACTGCCAATGGAGACATGCTTGATGGGACAGAAGTGCAATTTAAGTCAGTGACATTGCACAAGTATGTATCCGCTGAGAATGGGGGAGGAATGAATGTGACAGTTGACAGGGATGTCCCATCTTCATGGGAAACCTTCAGGTTATGGAGAGCATCTGAATCAGAATTTCAATTTCGTACCTCCGAAGGCCAATTTCTTACATGTGATGGTGGGGGCTGCTCTGTCTCTGCAACAGCAAAATCTCCTTCGACATCAGAGACATATGGAATTGAGCGGAATGGAAAAAATAGGATTCACCTCAAGATAAAGGGAGGGGCATATCTTCAGGCTACAACCAATGGTCAGCTTACAGCAGACTACCCAGGTGCACCAGGATGGGATGATAATGCTGCCACGTTTGAAATGACAATTGTATCTAATAAATTGCATGGAGATTACCAGCTAGCAAACGCATATGGGCATGGTCGGGCAAAAGACATTCTCAGGAGACATAGAAATAGCTTTATCACCATAGAAGATTTCAAATTTCTATATAAACATGGAATAAATACTGTGAGGATACCAGTTGGGTGGTGGATTGCTTATGATCCTGATCCTCCGAGTCCATTTATTGGAGGAAGTCTTGAAGCTCTAGATAATGCATTTTCATGGGCACAGGAATATGATATTAAATGCATAATTGACCTTCATGCTGCTCCTGGTTCCCAAAATGGGATGGAGCATAGTGCAAGCAGAGATGGATTTACAGGCTGGCCAACTTCTCCTGATTATATTTCCGACTCATTATATGTTATTGAATTTTTAGTTTCTAGATATGCAAGAAATCCTGCTTTGCTGGGAATTGAGCTATTGAATGAACCATCTGCTGCCACAGTTTCATTAGATGTTTTAATTTCATATTACAAGCAAGGCTACCAAATTGTTCGAAAATATTCATCATCAGCTTATGTGATAATCTGCCAGAGAATTGGTGTTGCCGATCCTATGGAACTTTATCAAGCCAACATAGGATCTCACAACTTAGTTTTGGATTTGCATTTCTACAATCTCTTCGACACATTTTTCAATAATATGAGTGCTATGGATAATATTCAATACATATACAAAAGCCGGGAAGGTCAACTGCAGGCCTTAAACAATTCAAATGGCCCACTTATTTTAGTTGGAGAATGGGTGAATGAGTGGAATGTAACAAACGGATCCCAAAAAGATTATCAAGACTTTGCAAGAGCACAGCTAGACGTCTATAATGCAGCTTCCTTTGGATGGTGCTATTGGACACTAAAAAATGATGAGAAGCACTGGGATTTTGAATGGAGCATTAGGAACAACTATCTTCAATTAGGTAACTCACCCAGCAAACGGAGCTTGAACATTCTAGGATTGTTAGGATTAGCATGCACCTGGTTTTGTCTACTTCCATTTTTGTGA 1605 0.4081 MGLVFTKWACAFLLCYYLITSEVYSVEGLHDGSKARDVNLGGWLVIEGWMIKPSLFGGTANGDMLDGTEVQFKSVTLHKYVSAENGGGMNVTVDRDVPSSWETFRLWRASESEFQFRTSEGQFLTCDGGGCSVSATAKSPSTSETYGIERNGKNRIHLKIKGGAYLQATTNGQLTADYPGAPGWDDNAATFEMTIVSNKLHGDYQLANAYGHGRAKDILRRHRNSFITIEDFKFLYKHGINTVRIPVGWWIAYDPDPPSPFIGGSLEALDNAFSWAQEYDIKCIIDLHAAPGSQNGMEHSASRDGFTGWPTSPDYISDSLYVIEFLVSRYARNPALLGIELLNEPSAATVSLDVLISYYKQGYQIVRKYSSSAYVIICQRIGVADPMELYQANIGSHNLVLDLHFYNLFDTFFNNMSAMDNIQYIYKSREGQLQALNNSNGPLILVGEWVNEWNVTNGSQKDYQDFARAQLDVYNAASFGWCYWTLKNDEKHWDFEWSIRNNYLQLGNSPSKRSLNILGLLGLACTWFCLLPFL* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0126 534 PANTHER - 27 512 - -
Gso18g0126 534 SUPERFAMILY (Trans)glycosidases 36 505 IPR017853 -
Gso18g0126 534 SUPERFAMILY Actin-crosslinking proteins 70 192 IPR008999 -
Gso18g0126 534 Pfam Cellulase (glycosyl hydrolase family 5) 227 489 IPR001547 GO:0004553|GO:0071704
Gso18g0126 534 PANTHER FASCIN 27 512 IPR010431 GO:0007015|GO:0051015
Gso18g0126 534 Gene3D Glycosidases 190 514 - -
Gso18g0126 534 ProSitePatterns Glycosyl hydrolases family 5 signature. 337 346 IPR018087 GO:0004553|GO:0005975
Gso18g0126 534 Gene3D - 59 189 - -
Gso18g0126 534 Pfam Fascin domain 80 177 IPR022768 GO:0030674|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0126 Gso-Chr18 1055111 1063872 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0126 - - gmx:100809472 1087.4