Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0117 ATGGCGGAGCTCCGGCACTCTTCATCCCTTGGCAGCCGAGCCTCCAATTCTCCGATGAAGCGAGACGCCGGCGCCGGCGCCGCCGATTCCTCCCCTCTCATTCCCGACAACCACCTCGCCGACGACGACGAGCACGATCGACACTCGTCCAAGGACCGCGACCGGCACATGTGCTCCTTCTTCACCGATGACCCTAGGGTTTCGCCTCACAACTCCAGGATCTCTCTTGTTTTCACATTACTTCTTCTTCTCGTTGGTTTAGTCTCCCTTTTCACCATCTTCAATAATCTCAATGCGCCTTACTTGTGTAAAAAAGATGGGATTGTTCTTCACTGCCCGCATGTTAAAGAATCACCATCACTTTGGGAAAATCCTTTCTCTTCCACAACATCTTGGAAGCCCTGTGCTGAGCGCCAGGATGGTGTTTTACCAGAACTTCCTCCTGAAAATGAAACAAATGGCTATATATTCATCCATGCTGAAGGTGGTCTAAATCAGCAAAGAATTGCGATATGCAATGCAGTGGCTGTGGCAAAAATATTAAATGCCACTCTTATTTTGCCTGTTTTGAAGCAGGACCAGATTTGGAAAGACCAAACGAAATTTGAAGACATTTTTGATGTGGATCACTTCATTGACTACCTGAAGTATGATGTTCGTATTGTCCGTGATATCCCAGAATGGTTTACCGATAAATCAGAGCTATTTACTAGCATAAGACGGACTGTAAAAAACATTCCCAAATATGCACCAGCACAATTTTACATCGATAATGTTCTGCCCCGAGTCAAGGAGAAGAAGATTATGGCTCTGAAACCCTTTGTTGACAGGCTGGGATATGACAATGTTCCTCCTGAAATCAACAAGTTGAGATGCAGAGTTAATTATCATGCACTGAAATTTCTTCCTGATATAGAGCAGATGGCTAATTCACTTGCATCAAGAATGAGAAACCGAACTGGCAGTTCAAATCCTTACATGGCTCTGCATCTTAGATTTGAGAAAGGAATGGTGGGACTATCATTCTGTGATTTTGTGGGGACAAGAGAGGAGAAAGCCAAAATGGCGGAGTATAGAAAAAAGGAGTGGCCTCGACGGTACAAGAATGGTTCCCATCTGTGGCAATTAGCTCTGCAGAAGCGAAAGGAAGGACGGTGTCCTCTAGAGCCTGGAGAAGTGGCTGTTATTCTTCGGGCCATGGGCTATCCAAAGGAAACTCAAATTTACGTAGCTTCTGGACAGGTGTATGGTGGACAGAACCGGATGGCTCCGCTAAGGAATATGTTCCCTAATCTGGTTACCAAGGAGGAGTTGGCAACTAAAGAGGAGTTAGATGGTTTCAGAAAGCATGTGACAAGCCTGGCAGCTCTTGACTTCTTGGTGTGCTTGAAGTCAGATGTATTCGTGATGACCCATGGAGGCAACTTTGCTAAGCTGATCATTGGAGCACGTAGATACATGGGTCACCGTCTAAAATCAATTAAGCCTGACAAAGGGCTAATGTCCAAGTCTTTTGGGGATCCATATATGGGTTGGGCTCCTTTTGTAGAAGATGTTGTTGTTACTCACCAGACACGGACGGGATTGCCAGAAGAGACTTTCCCTAACTACGACCTCTGGGAGAACCCTCTGACACCCTGCATGTGTAGAGCCTGA 1656 0.4607 MAELRHSSSLGSRASNSPMKRDAGAGAADSSPLIPDNHLADDDEHDRHSSKDRDRHMCSFFTDDPRVSPHNSRISLVFTLLLLLVGLVSLFTIFNNLNAPYLCKKDGIVLHCPHVKESPSLWENPFSSTTSWKPCAERQDGVLPELPPENETNGYIFIHAEGGLNQQRIAICNAVAVAKILNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKYDVRIVRDIPEWFTDKSELFTSIRRTVKNIPKYAPAQFYIDNVLPRVKEKKIMALKPFVDRLGYDNVPPEINKLRCRVNYHALKFLPDIEQMANSLASRMRNRTGSSNPYMALHLRFEKGMVGLSFCDFVGTREEKAKMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYPKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWAPFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCRA* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0117 551 CDD O-FucT_plant 155 490 IPR024709 -
Gso18g0117 551 PANTHER PROTEIN PECTIC ARABINOGALACTAN SYNTHESIS-RELATED 1 551 - -
Gso18g0117 551 Pfam GDP-fucose protein O-fucosyltransferase 155 487 IPR019378 -
Gso18g0117 551 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 1 551 - -
Gso18g0117 551 Gene3D - 300 494 - -
Gso18g0117 551 MobiDBLite consensus disorder prediction 36 55 - -
Gso18g0117 551 MobiDBLite consensus disorder prediction 1 55 - -
Gso18g0117 551 PIRSF UCP009360 36 551 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0117 Gso-Chr18 979133 985678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0117 121 550 Miscellaneous Gene Families AT1G22460 35.477 1.17e-92 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0117 - - gmx:100809112 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0117 18 979133 985678 Gso13g1503 13 30502772 30509214 GST