Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0099 ATGGCCTCGTTTGATGAACAACAAGGAAAGCCTTTACCCAAGTTTGGGGAATGGGATGTGAATGATCCTGCTTCAGCTGAAGGATTCACTGTTATATTCAACAAGGCCAGAGATGATAAGAAAATTGCCTCAGCATCAGGACGATTCCCTTCTCAGCGAAGATATGATTCTCGAAAGCATGGCAAGGATAAAAAAAAGTGCAAGAGTTCCTCCTCCTCCTCCTCCTCAAAGAAAAAATGGTCTTGCTTTGGCCCTTAG 258 0.438 MASFDEQQGKPLPKFGEWDVNDPASAEGFTVIFNKARDDKKIASASGRFPSQRRYDSRKHGKDKKKCKSSSSSSSSKKKWSCFGP* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0099 85 PANTHER PROTEIN NOI4 6 65 - -
Gso18g0099 85 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 7 41 IPR008700 -
Gso18g0099 85 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 6 65 IPR040387 -
Gso18g0099 85 MobiDBLite consensus disorder prediction 1 22 - -
Gso18g0099 85 MobiDBLite consensus disorder prediction 43 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0099 Gso-Chr18 817257 818311 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0099 - - gmx:102669667 141.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0099 18 817257 818311 Gso13g1523 13 30675045 30676710 GST