Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0093 ATGGCTGAATCATCGGCGTGTCTTGTTCGATCCTTCTCCACTCCCGCAGAGGCTACTTGTTGCGACGGTAACCCTATTCGTGCGCTTGGAGAATCTATCTCTTTTGGGAGGTTTATGACAGAAGGCCTGGATTGGGAGAAATGGTCAACATTTTCACACAATCGCTATGTAGAAGAAGCTGAGAAATATTCCAAGCCGGGTTCTGTTGCCGCGAAGAAAGCCTACTTTGAGGCTCATTACAAGAGAGCAGCTGCAGAGAGAGCAGCTGCATTGATCCCAGAAGCAAATGCTCAGGCTAATGGAACTTTTGAGGCACAAGTTCACGAAGGAAACTGTGCCGATTCATCCTTTGGGACGAGTTCAAATGTGGCAAATGTTGTGGCCGCCAATGAACAGCTGGATAATGAAACTGCTAATTACCAAGTTGTTGAATGTGCTGATACTGACCAACATAAATGTGATGCCGGACAAAGTCATTTGGACATTTCCAATGTGAAAGGAGCAGAGGATGTGCCACATCCTCGCACTGATACAGATCTTAACGTGGAAAGTTGCACATTTGTTGCTAATTCTTATTCTAACCAGCTTCATCATGTTGAGGACAATACATATATTGCTGTCCCTGCAGAAGAGAAGACACCTGATCATGGTGCTGTTGGTCAGGAAGTTTTAACTTTGTCTGTCAAGGGAAGAGAAGCAAACTCTTCTCCGAAATTATCAACCAAAACTGTGGTTGCCAAACATTCTCGTTCTCTTGATGAAAGGAAGGCTGCTGTGCTACCCAGAAGCGGAATAAACAGTGGTCCAAAAGTTAAGAAGTCTGTTGGAGACTCAGTTGAGAAGAAGAGACTAATTGCACAGTCAGTCCGCATGTCAATCAATCTTCCATCTGGCAGCGGTGAAACACGCAAAAGAACTGCCACTGCTTCACAGTCCAGAAATGGCACAAACAATTTTTCAACAAGTAAGAAGTCTGTTAGAGGGTTGGTTGAGAAGAAAAGAATAACTGCACCATCACTTCGCATGTCAATCAATCTCCCATCTGGTGCCGGTATGACAAGCAAAACAGATACTGTAGCTGCTAAACCCAGAAATGGAATAAACTTTGCTGCAAAAAGTATGAAATCTGTTGGAAACTCAGTGGAGAAGAGACCAACTAAAAGGTCACTCCACATGTCAATCAATCTGCCTTCTGGTGCAGGTGAAACAAGTAAAACAGCTTCAGTGTTGGAACAGAACGGAATTAAAAAAAATCATTCTAACATTTCCAAAAATAATCCAGGGGTGTTGCAGACATCCACTAAGGTATCTCATGGTTTGCTAAATCAAGCTTCAGCAAATCCCCCTTCTCAGGGTAGAAGGACTGAAAGACCACTTAATAAGTCTGTATCTGGAGCTCTTACAGCAAATGCAAAACCTTCCTCCTCCATTTCTTTTGACTGCCTGAAATCTTCAGGCCCCACCAAAAGCAACCCCCAATCAGCTACCATATCTACACCTTTTAGATTCAGAAGTGAAGAAAGAGCAGTTAAACGCAAAGAGTTCTTGCAGAGGATGGATGAAACTAAATCCAAGGAAGAAGAGAAAGTTAAGTTGCAACGGACTCTCAAGGGTAAAACAGAGCATGATCACAAGAAGCTGCGGCAGCGCAGTGGCTCTATATCCAAACTAAACGAAGACAAGCCTGGTGGATCACAATCTCCAAGCAATCAGACTAGAAAGATCTCACTTACACTGCCCCAGTCACCAAAACTTGGGAGGAAAGCGAGTTCTAGTTCTAGCACAGTTCAGGACAGAAGCTTAGGAAATTCATGGAAGCCTCCTATCAGCACCTCCAAACGTACTGCAGAAAAAAACTACCGAACAGCATGGCGACCAGTAACTTCATCATCAAATACCACAAGAGAAAATGCTTCACCAAATATTCAGCAATGA 1935 0.4357 MAESSACLVRSFSTPAEATCCDGNPIRALGESISFGRFMTEGLDWEKWSTFSHNRYVEEAEKYSKPGSVAAKKAYFEAHYKRAAAERAAALIPEANAQANGTFEAQVHEGNCADSSFGTSSNVANVVAANEQLDNETANYQVVECADTDQHKCDAGQSHLDISNVKGAEDVPHPRTDTDLNVESCTFVANSYSNQLHHVEDNTYIAVPAEEKTPDHGAVGQEVLTLSVKGREANSSPKLSTKTVVAKHSRSLDERKAAVLPRSGINSGPKVKKSVGDSVEKKRLIAQSVRMSINLPSGSGETRKRTATASQSRNGTNNFSTSKKSVRGLVEKKRITAPSLRMSINLPSGAGMTSKTDTVAAKPRNGINFAAKSMKSVGNSVEKRPTKRSLHMSINLPSGAGETSKTASVLEQNGIKKNHSNISKNNPGVLQTSTKVSHGLLNQASANPPSQGRRTERPLNKSVSGALTANAKPSSSISFDCLKSSGPTKSNPQSATISTPFRFRSEERAVKRKEFLQRMDETKSKEEEKVKLQRTLKGKTEHDHKKLRQRSGSISKLNEDKPGGSQSPSNQTRKISLTLPQSPKLGRKASSSSSTVQDRSLGNSWKPPISTSKRTAEKNYRTAWRPVTSSSNTTRENASPNIQQ* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0093 644 Pfam Targeting protein for Xklp2 (TPX2) domain 501 550 IPR027329 -
Gso18g0093 644 MobiDBLite consensus disorder prediction 556 644 - -
Gso18g0093 644 MobiDBLite consensus disorder prediction 465 501 - -
Gso18g0093 644 MobiDBLite consensus disorder prediction 514 555 - -
Gso18g0093 644 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 372 644 IPR044216 -
Gso18g0093 644 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 1 311 IPR044216 -
Gso18g0093 644 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 304 362 IPR044216 -
Gso18g0093 644 MobiDBLite consensus disorder prediction 294 325 - -
Gso18g0093 644 MobiDBLite consensus disorder prediction 465 502 - -
Gso18g0093 644 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 372 644 - -
Gso18g0093 644 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 304 362 - -
Gso18g0093 644 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 1 311 - -
Gso18g0093 644 MobiDBLite consensus disorder prediction 514 644 - -
Gso18g0093 644 MobiDBLite consensus disorder prediction 294 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0093 Gso-Chr18 771242 775779 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0093 - - gmx:100799349 1244.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0093 18 771242 775779 Gso13g1528 13 30722054 30726705 GST