Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0089 ATGACGGAAAGTGAGGGAAAGTGTAAGAAAATGGGCAAAGAGAAGAGAGGTAGAAGCTTCATCGCCTTCACCGGAGCTGCGGCGGTGCTTGGAATTGCGGCGAACCTAGCTATCACCGCAATCAAGTACCAGAAGGCAAAAAATGCTAAGAAGAAAGATCTTGCAGGTTCCAAGGTGCGCGTTAATCTCTCTGCATCTGAGATTCTTAAGCTGGCTGAGCAAATCATTGCTAACTCAAACAAGGCCCATAATTCTGTTGCGTCGGTGCCTCTCGACAAGGTTACATATGCAAATGTTATATCACCTCTGGCAGAACTGCAAGCGCAGCAATTCCCACTGGTCCAGTCTTGTGTGTTTCAGAAGATGGTATCTACTCGAGAGGATGTACGCAAAGCAAGTGCAGAAGCAGAGCGAAGAATAGATGCTCATCTTGATGCGTGCAGCAAACGTGAGGATGTGTATCTTGTCATTAAAGCATTTGCAGTAAAGGGGGAGTGGATGAATGCTGAAGCCAAACGCTTTGTTCAAATCCTGGTGAGAGATTTTGAGCGAAATGGATTGAACCTCACAGCAAGCAAAAGAGAAGAGTTGCAGCGTCTTAGGGCTCAGATTGATGAATTAAGTTTTAAATACATCCAAAATCTCAATGACGATAGCAAGTTTCTTCTCTTCACTGAGGCAGAGTTAGCTGGATTACCTCCAGAGTTTCTCAAGGGTTTAGATAAATCGGAAAATGGAAAATTTAAAATTTCCCTGAGAAGTCATCTTGTTGCAGCTGTACTTGAATTTTGCAAGGTTGGAACTACCAGGCGGATGGTATCAAGGGCATATGGGAATCAGTGTGGAGAAATCAATGTTTTTATCTTAGAAAGCCTGGTGCAACAACGCCATAAATATGCTCGTTTACTTGGCTACTCATGCTATGCAGAGTATGCCATCGATGTTAGAATGGCAAAGACACCAAAAAAGGTTTTTGAGTTCCTGAAAGACATATCGACAAGTTTAACTGACTTGGCCATGAAAGAACTTAATATCTTGAAAGATTTGAAGAAGAAAGAGGAAGGGGAGTTTCCATTTGGAATTGAGGACCTACTGTATTACGTAAAACGGGTTGAAGAGCAGGGTTATGATTTGGACTTTGGAGAGATCAAGCAATACTTTCCAATTAGTGTGGTTTTATCAGGGATCTTCAAAATTATCCAAGATCTATTTGGCTTAAGGTTTGAGAAAATTGCAGGAGCTGATGTTTGGCATTGTGATGTTTGTGTTTTTTCAGTGCTGGACTTGGGTTCTAGTGAACTCTTAGGTTATTGCTACTTTGATTTGTTCTCAAGGGAAGGAAAGTATGGTCATACTTGTGTGTTGGCTCTCCAGAACAGTGCATTAACAAGCAATGGGGCACAGCAGATACCAGTTGCATTGTTAATATCTCAGTGTCAGAAGGATGCTGATGGTAGTTCTGGATTATTACGGTTTTCTGAAGTGGTCAGTCTTTTCCATGAGTTTGGCCACGTGGTTCAACAAATTTGCAACCGTGCATCATTTACCAGAATTTCTGGATTATGTGTTGATCCTGACTTTGTGGAGATACCTGCTCAACTGTTAGAAAACTGGTGTTATGAAAGCTATTCTCTCAAGTTGATTTCAGGATTTTATCAGGATATTACAAAACCGTTAAAGGATGACATATGCAAATCAATTAAAAGATGGAGGACTTCTTTTTCTGCACTTAAATTGAAGCAAGATATTCTCTGCTGTCTTTTTGACCAAATCATACATTCTGCGGATAACATAGACATTCAGGAATTATTCAAGCATCTTCATCCCATGGAGATGTTAGGCTTGCCAATATTAGAAGGAACCAATCCAGCGTCATATTTTCCTTCTACTGTCATTGGTTATGAGGCAGCTTGCTACAGTCGTATATGGAGTGAGGTTTTTGCTGCTGATATATTCACCTCAAAGTTCTGCAACGATGTTTCAAACCAGCAAGCGGGCATGCAATTCAGGAACAAGGTATTGGCCTCGGCAGGAGTGAAAGACCCCATTGATGTGTTATCAGACTTTCTAGGAAGAGAACCATCAATCCAAGCTTACATTGAGAACAAAGTCAAGTATGTTTTGTAA 2127 0.4114 MTESEGKCKKMGKEKRGRSFIAFTGAAAVLGIAANLAITAIKYQKAKNAKKKDLAGSKVRVNLSASEILKLAEQIIANSNKAHNSVASVPLDKVTYANVISPLAELQAQQFPLVQSCVFQKMVSTREDVRKASAEAERRIDAHLDACSKREDVYLVIKAFAVKGEWMNAEAKRFVQILVRDFERNGLNLTASKREELQRLRAQIDELSFKYIQNLNDDSKFLLFTEAELAGLPPEFLKGLDKSENGKFKISLRSHLVAAVLEFCKVGTTRRMVSRAYGNQCGEINVFILESLVQQRHKYARLLGYSCYAEYAIDVRMAKTPKKVFEFLKDISTSLTDLAMKELNILKDLKKKEEGEFPFGIEDLLYYVKRVEEQGYDLDFGEIKQYFPISVVLSGIFKIIQDLFGLRFEKIAGADVWHCDVCVFSVLDLGSSELLGYCYFDLFSREGKYGHTCVLALQNSALTSNGAQQIPVALLISQCQKDADGSSGLLRFSEVVSLFHEFGHVVQQICNRASFTRISGLCVDPDFVEIPAQLLENWCYESYSLKLISGFYQDITKPLKDDICKSIKRWRTSFSALKLKQDILCCLFDQIIHSADNIDIQELFKHLHPMEMLGLPILEGTNPASYFPSTVIGYEAACYSRIWSEVFAADIFTSKFCNDVSNQQAGMQFRNKVLASAGVKDPIDVLSDFLGREPSIQAYIENKVKYVL* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0089 708 Gene3D Collagenase (Catalytic Domain) 388 538 IPR024079 GO:0008237
Gso18g0089 708 Gene3D Endopeptidase. Chain P; domain 1 37 184 IPR024080 -
Gso18g0089 708 Coils Coil 190 210 - -
Gso18g0089 708 PANTHER SACCHAROLYSIN 47 705 - -
Gso18g0089 708 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 62 701 - -
Gso18g0089 708 Gene3D Neurolysin, domain 3 194 700 IPR024077 -
Gso18g0089 708 Pfam Peptidase family M3 264 701 IPR001567 GO:0004222|GO:0006508
Gso18g0089 708 CDD M3A_TOP 69 701 - -
Gso18g0089 708 PANTHER PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED 47 705 IPR045090 GO:0004222|GO:0006508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0089 K01392 - gmx:100793518 1375.15