Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0054 ATGTACGGAACCGAGAATGACCGAGATGATTCGGAACGAACGGCGTTCAGAAGAGCAGAGAAGAAGTACAAGCTCTACTACGACAACAATGCTTCTTCCAAGAACAAAAGGAAAAAGCTACCTAAACCCGTGGATTTAACGGAGGTCCTTGACTTCAGATCTATTCTAGAATGCTATCTCCAAAACGATGTGCTTCCTCCGGGTGTTATCGTTCTTCACGACAACTTCACTTCTCCAGTTTTTTCTTTGCAAAATCGCCCAGGCTTTTATTTTATTCCTGGGGCATTAAGCATAGAGAGACAATGTAGTTTGATCAGGGAGAGTTTGACTGATTTTCCGCAGCCACCGAACAGAACAAATCACAATGCCATGTATGGTCCTATTCAGGATGTGTTTGTTGCGGCTAAAGAAGGGAAAGTTTTGGTTGAAGACAACTCTCCAATTACTTCATCTGAAACTGATACTGATATAGATCATAAAGATGGTAAGGAATGGAAGTTTACTACTGAAAAGGACGCGCTGTCAAGAAAGTGCAGATCAGCTTCTGCTTCTGTGTTACTTCGAAAGTTGCGATGGAGCACCCTTGGCCTACAATTTGATTGGTCCAAGCGGAATTATGATGTGTCTCTCCCACATAACAAAATCCCTGAAGCATTGTGCGAGCTTGCCAAACAATTGGCAAAACCTGCTTTGCCTACTGGTGTTGAATTCAGACCTGAAGCTGCAATAGTGAATTACTTCGGCTTAGGGGACACATTGGGTGGCCACCTTGATGACATGGAAGCAGATTGGAGCAAGCCTATAGTTAGTCTAAGTCTGGGCTGCAAAGCTATATTTCTTTTAGGAGGAAAATCCAGAGAGGATACTCCCCTGGCAATGTTCCTTCAAAGTGGCGATGTTGTACTTATGGCTGGAGATGCAAGGGAATGCTTTCATGGGGTCCCTCGGATCTTCACAGATAAAGAAAATGCTGAAATAGGCCATCTTGAGACACAGCTGACGCGTGAAGATGATCTTTGTTTCTTACAATACATTCAAACTTCTAGAATCAACATCAATATCAGACAAGTTTTTTGA 1077 0.429 MYGTENDRDDSERTAFRRAEKKYKLYYDNNASSKNKRKKLPKPVDLTEVLDFRSILECYLQNDVLPPGVIVLHDNFTSPVFSLQNRPGFYFIPGALSIERQCSLIRESLTDFPQPPNRTNHNAMYGPIQDVFVAAKEGKVLVEDNSPITSSETDTDIDHKDGKEWKFTTEKDALSRKCRSASASVLLRKLRWSTLGLQFDWSKRNYDVSLPHNKIPEALCELAKQLAKPALPTGVEFRPEAAIVNYFGLGDTLGGHLDDMEADWSKPIVSLSLGCKAIFLLGGKSREDTPLAMFLQSGDVVLMAGDARECFHGVPRIFTDKENAEIGHLETQLTREDDLCFLQYIQTSRININIRQVF* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0054 358 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 238 358 IPR005123 -
Gso18g0054 358 PANTHER ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB 1 358 - -
Gso18g0054 358 Gene3D - 141 357 IPR037151 -
Gso18g0054 358 SUPERFAMILY Clavaminate synthase-like 87 357 - -
Gso18g0054 358 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 1 358 IPR004574 -
Gso18g0054 358 Pfam 2OG-Fe(II) oxygenase superfamily 157 355 IPR027450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0054 Gso-Chr18 462973 465699 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0054 K10765 - gmx:100811774 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0054 18 462973 465699 Gso13g1568 13 31013381 31016114 GST