Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0034 ATGGCCGCTTGTGGCTATATATCTGCTGCCAACTTCAATTATCTCGTTGGCGCCAGAAACATATCCAAATTCGCTTCTTCAGACGCCACAATTTCGTTTTCATTTGGCGGGAGCGACTCAATGGGTCTTACTTTGCGACCCGCTCCGATTCGTGCTCCTAAGAGGAACCATTTCTCTCCCTTGCGTGTCGTTTGCGTCGATTATCCACGCCCGGAGCTCGAAAACACCGTTAATTTCGTTGAAGCTGCTTACTTGTCTTCCACCTTTCGTGCTTCTCCGCGTCCTCTAAAACCCTTGAACATCGTTATTGCCGGTGCAGGATTGGCTGGTTTATCAACTGCAAAATATTTGGCTGATGCTGGGCATAAACCTATATTGCTGGAAGCAAGAGACGTTCTAGGTGGAAAGGTTGCTGCATGGAAAGACAAGGATGGAGACTGGTACGAGACAGGCCTACACATCTTTTTTGGGGCTTACCCTAATGTGCAGAACCTTTTTGGAGAACTTGGCATTAATGATCGGTTACAATGGAAAGAGCATTCTATGATTTTTGCTATGCCAAATAAGCCTGGAGAGTTTAGTCGATTTGATTTTCCTGAAGTTCTTCCCTCCCCATTGAATGGAATATGGGCAATATTGAGGAACAATGAGATGCTTACATGGCCAGAGAAAGTAAAATTTGCAATTGGGCTTCTCCCAGCTATGCTTGGCGGACAGCCATATGTTGAGGCTCAAGATGGTCTTTCTGTTCAAGAATGGATGAAAAAGCAGGGCGTACCTGAACGGGTAACTGATGAGGTGTTCATAGCAATGTCTAAGGCACTAAACTTCATCAATCCTGATGAACTTTCAATGCAATGTATATTGATTGCTTTAAACCGATTTCTTCAGGAGAAACATGGTTCTAAGATGGCCTTTTTGGATGGCAATCCACCCGAAAGACTTTGTATGCCGATAGTTGATCATATTCAGTCCTTGGGTGGTGAAGTTCATCTAAATTCGCGCATTCAAAAAATTGAGCTAAATGATGATGGAACGGTGAAGAGCTTCTTACTAAATAATGGGAAAGTGATGGAAGGGGATGCTTATGTGTTTGCAACTCCAGTGGATATTCTGAAGCTTCTTCTACCAGATAACTGGAAAGGGATTCCATATTTCCAGAGATTGGATAAATTAGTTGGCGTCCCAGTCATAAATGTTCACATATGGTTTGACAGAAAACTGAAGAACACATATGATCACCTTCTCTTTAGCAGAAGTCCCCTTCTGAGTGTATATGCTGACATGTCAGTAACTTGCAAGGAATATTATAGCCCAAACCAGTCAATGTTAGAGTTGGTTTTTGCACCAGCCGAAGAATGGATTTCACGTAGTGACGATGATATTATTCAAGCCACGATGACTGAGCTTGCCAAACTCTTTCCTGATGAAATTTCTGCAGACCAAAGCAAAGCTAAGATTCTCAAGTACCATGTTGTTAAAACACCAAGGTCGGTTTACAAAACTGTTCCAAATTGTGAACCTTGTCGACCCATTCAAAGATCTCCTATAGAAGGTTTCTATTTAGCTGGAGATTACACAAAACAAAAATATTTAGCTTCAATGGAAGGCGCTGTTCTTTCTGGGAAGCTTTGTGCACAGGCTATTGTACAGGATTCTGAGCTACTAGCTACTCGGGGCCAGAAAAGAATGGCTAAAGCAAGTGTTGTGTAA 1713 0.4256 MAACGYISAANFNYLVGARNISKFASSDATISFSFGGSDSMGLTLRPAPIRAPKRNHFSPLRVVCVDYPRPELENTVNFVEAAYLSSTFRASPRPLKPLNIVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDKDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPSPLNGIWAILRNNEMLTWPEKVKFAIGLLPAMLGGQPYVEAQDGLSVQEWMKKQGVPERVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVHLNSRIQKIELNDDGTVKSFLLNNGKVMEGDAYVFATPVDILKLLLPDNWKGIPYFQRLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDDDIIQATMTELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPIQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDSELLATRGQKRMAKASVV* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0034 570 PANTHER PROTOPORPHYRINOGEN OXIDASE 43 569 - -
Gso18g0034 570 Gene3D - 98 559 IPR036188 -
Gso18g0034 570 SUPERFAMILY FAD/NAD(P)-binding domain 98 551 IPR036188 -
Gso18g0034 570 PANTHER BNACNNG70650D PROTEIN 43 569 - -
Gso18g0034 570 Pfam Flavin containing amine oxidoreductase 108 549 IPR002937 GO:0016491
Gso18g0034 570 Coils Coil 570 570 - -
Gso18g0034 570 TIGRFAM phytoene_desat: phytoene desaturase 101 550 IPR014102 GO:0016117|GO:0016166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0034 Gso-Chr18 324720 333143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0034 K02293 - gmx:547970 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0034 18 324720 333143 Gso13g1588 13 31149593 31156559 GST