Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0033 ATGAAGCGCTTCATGCTCCCAAGAAACCCTCTCAGGGACGCAGCAGAGCTTCCTTCTTCGCCAAGCCCAACCCCAACTACCAGCTCCGCCAAACCCCGTCCCTCTTCTCGCAAACACAAACCCTCCAAAGAGAACGACCCTCCCTCCGATCCCAATCTCGTTACTCCCTCCCCTGCCAAATTGAAGAGCCCCTTGCCCCCGAGACCCCCTTCTTCCAACCCTCTCAAGCGCAAGCTCACCGCCGCCGATGCCCTAACCGACAATTCCCTCCCCGCACCCTCCGATTCCGGCGTCAAGGTTATTGTCAGGATGAGGCCGCTGTCTTCGGACAAGGACGAAGGAGATCCCACAGTTCAGAAGGTTTCCAATGATTCCTTGTCCATTAATGGATACAATTTCACCTTCGACTCCGTTGCTGACATGGCGGCTACTCAGCTGGATATTTTCGAACACGTTGGGGTGCCTCTGGTGGAGCATTGTTTGGCCGGGTTCAATAGTTCGGTTTTTGCTTATGGACAGACGGGGAGTGGGAAGACTTATACAATGTGGGGTCCTGCCAATTGTTTGTCGGATGAAAATGATCAGCAAGGACTTGCCCCCCGTGTTTTTCAGCAACTCTTTGAACGCATAAGTGAAGAGCAAACTAAGCATTCTGAAAACCAACTCAGCTATCAGTGCCACTGCTCTTTTCTTGAGATATACAATGAGCAAATCATGGATCTGTTGGATCCAAGTCAGAAAAACCTACAGATTAGAGAAGATGTCAAGTCTGGTGTCTATGTTGAAAATCTTACAGAGGAGGATGTGTCTTCAATGAAGGATGTAACTCAGCTTTTAATAAAGGGACTATCGAACAGGAGAACTGGTGCAACCAGTATAAATTCTGAGAGTTCCCGCTCCCATACTGTTTTTATTTGTGTTGTTGAATCTCGATGCAAGAGTGCATCAGATGGCATGAGCAGATTTAAAACAAGTAGGATCAATCTTGTTGACCTAGCTGGGTCAGAACGGCAAAAATCAACAGGTGCCGCAGGAGAGCGATTGAAGGAAGCTGGCAATATTAATAGATCACTCTCACAGCTTGGGAATCTGATTAATATTCTTGCGGAAGTCTCTCAAACAGGAAAGCAGCGGCATATACCGTATAGAGATTCTAGGTTGACATTTTTGTTGCAGGAGTCTCTTGGAGGAAATGCAAAATTAGCAATGATTTGTGCTATTTCACCAGCACAAAGTTGTAGGAGTGAAACATTCAGTACACTGAGATTTGCACAACGTGCCAAAGCTATCAAGAACAAGGCAGTTGTTAATGAAGTTATGGAAGATAATGTGAAGCACTTGCGACAAGTGATTCGGCAACTAAGGGATGAACTTCATCGAATTAAAGCAAATGGTTACAACCCAATGGAGTCAAGTGGAGGTCATTCAGCAGCTTGGATCCGACGAAGCTTGACTTTATTACAATCCAGCCTCAACCGGCCACCACCATTATCCCGTCTTGATGAAGATGGTGATGAGGAGATGGAGATTGATGAGGAAGGTCTTGAGGACCATGATGGAGTTTCCTACAATGCCAATATGCCGAGTAATTGTAATATTATAGCCGATAATGACAATGAAATGAACACTAATGATCAGGATTTGGCTCAACCTAGCGAGGAGGAAAATATAGCTAGTTGTTCTGTTAGTAAAGGTTTGAATGAAGAACCATCCTGTGCAATGGTCCGAAGCAGTTTCTCTTGTCCTGTGGGTGAATCTGATTCTCCTAGTGCAGCAATGAATTGTGTCTCGCCTGCCGGCCTCAGCATAGTTCACTGCGATTTATCCCCAATCCTTTCCCCAACTCCTAGTGTTTCACCTAGAATCAGCACCAGCAGGAAAAGTCTGAGGACATCAACAGGGCTGTCTCCTTCTGAGAATGATCTTCATGTTGAAAAAGATTTGGACATGAAAACCAGCAATAAGAAAAGCTCAACTTCTGCCTTTTCTAGTCAGACAGCTCCAAATTTCCTTAATAAAACAGAAAATTTAGCAGCAAGCATACAGCATGGTCTTGAAATTATCGATAGTTACCAACGTAATTCAGCTTTGAGGCAGTCACCATATAGGTTTTCATTACAACCAAGAAAATCTAAATTAACTTTTCCAGCTAGCAAAGTTGATGTGGGCCTACAGACTTCTCTTGATGATATTGTTGGAGAAGATTCTGTTTTATTCACCTGTAGTAATTGTAACAGCAGAACGCAACTTCATGTCAATGAGACTGACAATGATTCAAACCTACAGTTGGTACCTGTTGATTGCCATGAGTCTGCTGATAAGACAAAGAAGCAAGTTATCAAAGCAGTAGAGAAGGTTTTGGCAGGATCTATAAGGAGAGAAATGGCCCTTGAAGAGTTCTGTGCCAAGCAGACCTCTGAGATAATGCAGCTTAATCGCCTGGTGCAACAGTACAAGCATGAGAGGGAATGCAATGCCATAATTGCACAGACAAGGGAAGATAAAATTCTTCGCCTTGAGAGCCTTATGGATGGTGTTTTACCCACTGAAGAGTTCATGGAGGAAGAGCTAGTGGTTCTTACCCATGAGCATAAGATTTTAAAGGAAAAGTATGAGAATCATCCAGAAGTTTTGAAGATGGAGATAGAGTTGAAAAAAGTGCAAGAGGAACTAGAGAAGTATCAAAATTTCTACAAATTGGGGGAGAGAGAAGTGTTGATGGAAGAGATACAAAGTTTAAGAAGTCAGCTTCAATTTTATGTTGACTCTTCATCCACATCAGCAAGGAAGCAGTATCCATTATTGCAATTGACTTACTTGTCTGAGCCCAGTATGGCAGCAACCCTCACCGCCATTCCAGTGTCGACAGAGGAGAGAGTAGAGACAAATGAAACTCTTGCATCATCCAGGAATGATATTGAAGTACAATTTGAACAAGAAAGAATTAAATGGACAGAGGCAGAAAGCAGGTGGATTTCTCTTTCTGAAGAACTGAGAGCTGAGCTTGAAAGTAGCAGGTTGCTAGCTGAAAAGAGAAAGCAGGAATTAGATGCTGAGAGACAGTGTACTCAGGAGCTTCAGGAAGCCATGCACATGGCTATAGAAGGCCATGCAAGACTTTTAGAGCAATATGCAGATTTGGAAGAGAAGCACATCCATTTGCTTGCAAGGCATAGACAGATCCAGGATGGAATTGAGGATGTCAAGAAAGCGGCTTCCAGAGCAGGAGTACGAGGTGCGGAGTCTAAGTTCATAAATGCCCTTGCTGCTGAAATTTCAGCTTTAAAAGCAGAAAGAGAAAAAGAACAGCGAATCTTAAGAGATGAAAATAAAGGGCTTCAGTCTCAGTTGAAGGACACTGCAGAAGCAGTGCAAGCTGCTGGTGAACTGCTTTTGCGGCTTAAAGAGGCTGAAGAAGCTGTCACTACTGCACAGAAACAGGCTATGGATGCAGAACAGGAAGCTGCCAAGGCCTACAAACAAATTGATAAGTTGAAGAATAAACACGAAAAGGAGATTATCACACTTAATGAGCTTCTTGCAGAAGCACGTTTGCCAAAGGAATCTGTACTACCGACTTATGATGACGATGGTGTCATGCCCAGTTATGACAACTCAAAGGAGCCAAACAGTGTTAATGATCAGTTTGAGCCCTTTACTAATAATGCAGAGTATGGTGAGCTTGCCAAACTAGCAGAACCATCGTGGTTCTCTGGTTACGACAGATGTAATATATAA 3738 0.4371 MKRFMLPRNPLRDAAELPSSPSPTPTTSSAKPRPSSRKHKPSKENDPPSDPNLVTPSPAKLKSPLPPRPPSSNPLKRKLTAADALTDNSLPAPSDSGVKVIVRMRPLSSDKDEGDPTVQKVSNDSLSINGYNFTFDSVADMAATQLDIFEHVGVPLVEHCLAGFNSSVFAYGQTGSGKTYTMWGPANCLSDENDQQGLAPRVFQQLFERISEEQTKHSENQLSYQCHCSFLEIYNEQIMDLLDPSQKNLQIREDVKSGVYVENLTEEDVSSMKDVTQLLIKGLSNRRTGATSINSESSRSHTVFICVVESRCKSASDGMSRFKTSRINLVDLAGSERQKSTGAAGERLKEAGNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLAMICAISPAQSCRSETFSTLRFAQRAKAIKNKAVVNEVMEDNVKHLRQVIRQLRDELHRIKANGYNPMESSGGHSAAWIRRSLTLLQSSLNRPPPLSRLDEDGDEEMEIDEEGLEDHDGVSYNANMPSNCNIIADNDNEMNTNDQDLAQPSEEENIASCSVSKGLNEEPSCAMVRSSFSCPVGESDSPSAAMNCVSPAGLSIVHCDLSPILSPTPSVSPRISTSRKSLRTSTGLSPSENDLHVEKDLDMKTSNKKSSTSAFSSQTAPNFLNKTENLAASIQHGLEIIDSYQRNSALRQSPYRFSLQPRKSKLTFPASKVDVGLQTSLDDIVGEDSVLFTCSNCNSRTQLHVNETDNDSNLQLVPVDCHESADKTKKQVIKAVEKVLAGSIRREMALEEFCAKQTSEIMQLNRLVQQYKHERECNAIIAQTREDKILRLESLMDGVLPTEEFMEEELVVLTHEHKILKEKYENHPEVLKMEIELKKVQEELEKYQNFYKLGEREVLMEEIQSLRSQLQFYVDSSSTSARKQYPLLQLTYLSEPSMAATLTAIPVSTEERVETNETLASSRNDIEVQFEQERIKWTEAESRWISLSEELRAELESSRLLAEKRKQELDAERQCTQELQEAMHMAIEGHARLLEQYADLEEKHIHLLARHRQIQDGIEDVKKAASRAGVRGAESKFINALAAEISALKAEREKEQRILRDENKGLQSQLKDTAEAVQAAGELLLRLKEAEEAVTTAQKQAMDAEQEAAKAYKQIDKLKNKHEKEIITLNELLAEARLPKESVLPTYDDDGVMPSYDNSKEPNSVNDQFEPFTNNAEYGELAKLAEPSWFSGYDRCNI* 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0033 1245 Coils Coil 801 821 - -
Gso18g0033 1245 Coils Coil 877 904 - -
Gso18g0033 1245 MobiDBLite consensus disorder prediction 614 664 - -
Gso18g0033 1245 MobiDBLite consensus disorder prediction 614 639 - -
Gso18g0033 1245 PANTHER CENTROMERE PROTEIN E 554 1245 - -
Gso18g0033 1245 PANTHER CENTROMERE PROTEIN E 63 516 - -
Gso18g0033 1245 Pfam Kinesin motor domain 114 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g0033 1245 Coils Coil 1127 1182 - -
Gso18g0033 1245 Gene3D Kinesin motor domain 91 463 IPR036961 -
Gso18g0033 1245 Coils Coil 437 464 - -
Gso18g0033 1245 ProSitePatterns Kinesin motor domain signature. 325 336 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso18g0033 1245 ProSiteProfiles Kinesin motor domain profile. 97 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g0033 1245 SMART kinesin_4 95 438 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g0033 1245 PANTHER KINESIN-LIKE PROTEIN KIN-12B 63 516 - -
Gso18g0033 1245 PANTHER KINESIN-LIKE PROTEIN KIN-12B 554 1245 - -
Gso18g0033 1245 Coils Coil 1085 1105 - -
Gso18g0033 1245 MobiDBLite consensus disorder prediction 1192 1211 - -
Gso18g0033 1245 PRINTS Kinesin heavy chain signature 163 184 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g0033 1245 PRINTS Kinesin heavy chain signature 291 308 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g0033 1245 PRINTS Kinesin heavy chain signature 326 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g0033 1245 PRINTS Kinesin heavy chain signature 380 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g0033 1245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 462 IPR027417 -
Gso18g0033 1245 MobiDBLite consensus disorder prediction 1 76 - -
Gso18g0033 1245 Coils Coil 995 1019 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0033 Gso-Chr18 314172 321037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0033 35 462 Miscellaneous Gene Families AT4G39050 37.011 1.13e-65 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0033 K10400 - gmx:100790375 2328.9