Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0026 ATGGTGCAGCACCGCTTCCTCCTCATAACCTACCCCATACAAGGCCACATAAACCCCTCCATCCAGTTCGCCAAGCGACTCGTTTCCATGGGCGTCCACGTCACCTTCGCCACCAGCCTCTACCTCCACCGTCGCATGCTCAAAAAGCCCACCATCCCCGGCCTCTCCTTCGCCACCTTCTCCGACGGCTATGACGACGGTTACAAAGCCACCGACGACTCCTCCCTCTCCTCCTACATGTCCGAGTTGAAGCGCCGCGGCTCAGAGTTCCTCAGAAACATAATTACCGCCGCTAAACAAGAAGGGCAACCTTTCACATGCTTAGCCTACACCATCCTGCTTCCCTGGGCTGCAAAGGTGGCGCGTGAGCTTCACATTCCGGGGGCTCTTCTGTGGATTCAAGCCGCCACTGTTTTTGACATCTACTATTACTACTTCCACGAATACGGGGACTCCTTTAACTACAAATCAGACCCCACCATAGAGTTACCGGGTTTGCCATTCTCTCTCACAGCACGTGACGTTCCTTCCTTCCTCTTACCCTCCAATATCTATAGATTTGCTCTTCCAACCCTCCAAGAACAGTTTCAGGATCTTGACGACGAAACCAACCCGATAATCCTCGTGAACACCTTTCAGGACTTGGAACCCGATGCCTTGAGAGCGGTTGATAAGTTCACCATGATACCAATTGGGCCGTTGAATATTCCCTCTGCTTTCTTGGACGGTAAAGATCCCGCGGATACTTCGTATGGCGGTGATCTCTTCGATGCTTCAAATGATTACGTTGAATGGTTGGACTCACAGCCTGAGTTATCTGTGGTTTATGTTTCATTTGGTACCCTTGCTGTGTTGGCTGATAGACAGATGAAGGAGCTTGCACGCGCGCTGCTAGATTCCGGATATCTCTTCTTGTGGGTCATTAGAGATATGCAAGGAATAGAAGATAACTGCAGAGAGGAACTGGAGCAGAGGGGTAAGATTGTGAAATGGTGTTCTCAGGTGGAGGTTCTGTCGCATGGTTCCTTGGGTTGTTTTGTAACGCATTGTGGATGGAATTCGACTATGGAAAGTTTGGGTTCGGGGGTTCCTATGGTGGCGTTTCCGCAGTGGACAGACCAAGGGACGAATGCAAAGATGGTGCAAGATGTGTGGAAGACGGGGGTGAGGGTGGATGATAAGGTGAATGTTGAGGAAGGGATAGTGGAAGCAGAGGAGATTAGGAAGTGTTTGGATGTGGTCATGGGGAGTGGAGGAAAAGGACAGGAATTCAGAAGGAATGCTGATAAATGGAAATGCTTGGCCAGGGAAGCCGTCACGGAAGGAGGCTCTTCGGATAGTAATATGAGGACTTTTCTCCATGATGTTGCAAAATTTGGACATGATTGTTTTATGTAA 1398 0.4986 MVQHRFLLITYPIQGHINPSIQFAKRLVSMGVHVTFATSLYLHRRMLKKPTIPGLSFATFSDGYDDGYKATDDSSLSSYMSELKRRGSEFLRNIITAAKQEGQPFTCLAYTILLPWAAKVARELHIPGALLWIQAATVFDIYYYYFHEYGDSFNYKSDPTIELPGLPFSLTARDVPSFLLPSNIYRFALPTLQEQFQDLDDETNPIILVNTFQDLEPDALRAVDKFTMIPIGPLNIPSAFLDGKDPADTSYGGDLFDASNDYVEWLDSQPELSVVYVSFGTLAVLADRQMKELARALLDSGYLFLWVIRDMQGIEDNCREELEQRGKIVKWCSQVEVLSHGSLGCFVTHCGWNSTMESLGSGVPMVAFPQWTDQGTNAKMVQDVWKTGVRVDDKVNVEEGIVEAEEIRKCLDVVMGSGGKGQEFRRNADKWKCLAREAVTEGGSSDSNMRTFLHDVAKFGHDCFM* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0026 465 CDD GT1_Gtf-like 5 438 IPR002213 GO:0008194
Gso18g0026 465 PANTHER GLYCOSYLTRANSFERASE 3 457 - -
Gso18g0026 465 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 3 457 - -
Gso18g0026 465 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 260 401 IPR002213 GO:0008194
Gso18g0026 465 ProSitePatterns UDP-glycosyltransferases signature. 331 374 IPR035595 -
Gso18g0026 465 Gene3D Glycogen Phosphorylase B; 9 449 - -
Gso18g0026 465 Gene3D Glycogen Phosphorylase B; 250 437 - -
Gso18g0026 465 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0026 Gso-Chr18 269519 271381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0026 6 455 Glycosyltransferase AT4G15550 48.745 9.33e-154 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0026 - - gmx:100800222 952.97