Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0010 ATGAAATCTTTGACTTTTGCCTTTTTTTTTTCCTTTATCCCAATGCATTTAAGCATCTCAACTCATTTTGCTAGCTGTCATTGCACTCCTGAAATGGGTTGGGTTATAGTGTGTATGTTGTTTTCTCTAAGTTGTGTCATTGTTGATGGCGGAGTTCCAACAACTCTGGATGGACCCTTCAAGCCTGTGACCGTTCCTCTTGATCAGAGCTTCCGAGGAAACGCCGTGGACCTGACAGATACAGATCCTCTGGTTCAAAGAACCGTTGAAGGGTTCCAGCCAGAACAAATCTCTCTCTCACTCTCTGCTTCTCATGATTCTGTTTGGATTTCTTGGATTACAGGGGAATTCCAAATTGGGGACAATATAGAACCCTTAGATCCTGAAACTGTTGCTAGCATAGTTCAATATGGAAGGTTCGGAAGGTCCATGAGACACCAAGCAACGGGTTATTCCCTCGTTTACAGTCAACTTTATCCTTTTGAAGGCCTTCAGAACTACACCTCTGGAATTATACATCATGTTCGTCTCACAGGATTGAGACCCAACACACTATATCAATATAAATGTGGAGATCCTTCTTTGTCAGGAATGAGTGACGTTCATTATTTCAGGACTATGCCAGCTTCAGGCCCCAAGAGCTACCCTAGCAGAATAGCAGTGGTTGGAGACTTGGGTCTTACATACAATACCACATCCACTGTTAATCATATGACCAGTAACCATCCTGATCTTATTCTGTTGGTTGGAGATGTTAGCTGTGCCAACCTCTATCTTACTAATGGCACTGGGGCAGACTGCTACTCTTGCTCATTTCCTAACACTCCCATCCATGAAACCTATCAGCCTCGTTGGGATTATTGGGGAAGGTACATGCAGCCTCTGATTTCTAGTGTCCCAATAATGGTAATAGAAGGGAATCATGAGATAGAAGAACAAGCTGAAAACCAGACATTTGTTGCTTATAGTTCTCGATTTGCATTCCCATCAGAAGAGAGTGGATCATCATCCACTTTCTATTATTCTTTCAATGCTGGGGGGATACATTTTATAATGCTGGGGGCCTACATATCCTATGACAAATCAGGGGACCAGTACAAGTGGTTGGAGAGAGACTTGGCTTCTGTTGACAGGGAAGTAACTCCGTGGTTGATAGCTACATGGCATGCACCTTGGTATAGCACCTACAAGGCTCATTATAGAGAAGCAGAGTGTATGAGGGTGGAGATGGAAGACTTATTATATAAATATGGCGTTGACATTGTCTTCAATGGACATGTTCATGCGTATGAGAGATCAAACAGGGTATACAACTACACATTGGATCCTTGTGGTCCTGTTTATATCACGGTTGGAGACGGTGGTAACAGGGAAAAGATGGCAATCACACATGCTGATGAACCTGGACAGTGTCCAGAACCATCAACTACACCAGATGACTATATGGGTGGCTTCTGTGCCTTTAATTTTACTTCCGGTCCAGCAGAAGGTAACTTCTGTTGGGACCGACAGCCTGATTATAGTGCTTTCAGAGAAAGTAGCTTCGGTCATGGCATTCTAGAGGTGAAAAATGAAACCCATGCACTGTGGATTTGGCATCGCAATCAAGACTTTTATGGCAGTGCTGGAGATGAGATTTACATTGTTAGGGAACCTCAAAACTGCCCACCAATCAAGCCAGAGGAGGGTGCTAAAATATTTAACTTCAAGATGCATTAA 1719 0.4322 MKSLTFAFFFSFIPMHLSISTHFASCHCTPEMGWVIVCMLFSLSCVIVDGGVPTTLDGPFKPVTVPLDQSFRGNAVDLTDTDPLVQRTVEGFQPEQISLSLSASHDSVWISWITGEFQIGDNIEPLDPETVASIVQYGRFGRSMRHQATGYSLVYSQLYPFEGLQNYTSGIIHHVRLTGLRPNTLYQYKCGDPSLSGMSDVHYFRTMPASGPKSYPSRIAVVGDLGLTYNTTSTVNHMTSNHPDLILLVGDVSCANLYLTNGTGADCYSCSFPNTPIHETYQPRWDYWGRYMQPLISSVPIMVIEGNHEIEEQAENQTFVAYSSRFAFPSEESGSSSTFYYSFNAGGIHFIMLGAYISYDKSGDQYKWLERDLASVDREVTPWLIATWHAPWYSTYKAHYREAECMRVEMEDLLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREKMAITHADEPGQCPEPSTTPDDYMGGFCAFNFTSGPAEGNFCWDRQPDYSAFRESSFGHGILEVKNETHALWIWHRNQDFYGSAGDEIYIVREPQNCPPIKPEEGAKIFNFKMH* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0010 572 Pfam Calcineurin-like phosphoesterase 218 430 IPR004843 GO:0016787
Gso18g0010 572 PANTHER PURPLE ACID PHOSPHATASE 13 35 558 - -
Gso18g0010 572 Pfam Iron/zinc purple acid phosphatase-like protein C 445 537 IPR025733 -
Gso18g0010 572 SUPERFAMILY Purple acid phosphatase, N-terminal domain 72 208 IPR008963 GO:0003993|GO:0046872
Gso18g0010 572 CDD MPP_PAPs 213 550 IPR041792 -
Gso18g0010 572 Pfam Purple acid Phosphatase, N-terminal domain 94 206 IPR015914 GO:0003993|GO:0046872
Gso18g0010 572 PANTHER ACID PHOSPHATASE RELATED 35 558 IPR039331 GO:0003993
Gso18g0010 572 Gene3D - 213 479 IPR029052 -
Gso18g0010 572 Gene3D - 480 556 IPR029052 -
Gso18g0010 572 Gene3D - 93 210 - -
Gso18g0010 572 SUPERFAMILY Metallo-dependent phosphatases 218 539 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0010 Gso-Chr18 137057 140637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0010 93 484 Miscellaneous Gene Families AT2G03450 25.115 6.94e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0010 K22390 - gmx:100784006 1215.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0010 18 137057 140637 Gso13g1611 13 31341746 31344277 GST