Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2080 ATGGCCCTGAACGATTTTTTCGCTGGGGAGATCGCGACGGAGCTTCTGAAAATGCTGATAAACATCTCCCGGAAGTCCCTACTCTGCCGCGGCAGCGCCGACCAGCTCATCAGCTACATCCAGGACCTCCTCCCCACCATCGAGGAAATCAAGTACTCCGGCGTCGAGCTTCCTGCGCAGCGCCAGTCGCAACTCGACCGTCTCTCGGAGATTCTCCGCTCCGGCGTCGAGCTCTCCCACAAGGTCCTCGCCTCCAGCCGCTGGAACGTCTACCGCAACCTCCACCTCGCAAAAAAAATGGACAAGCTCGAGAAGAACGTGTCCAAGTTCTTGGTGGGTCCCATGCAGGCGCATATCATGGCGGACATACATCACACGCGGTTCCAGATGGAGGAGCGGTTCGACCGGGTTGATAATTCGGTTCGCCGGTTGGAGAAGTACTTCGGGAATATGAAGATTGGTGTTGGCGGCGGAGGGTGGGTGGAGGAGGCTGTGAGGAGCGTGGACGAGGATGTTGTTGATAGTAGCTCTGCTGTCGGGTTGGGTTTCGGGAAGAATAAGGTTAGGGAGATGGTTATCGGAAGGGAGGATCTTTGGGTTGTCGGGATTTCCGGGATTGGTGGCTCCGGGAAAACCACTCTTGCTCGAGAGCTCTGCAAAGATAATCAAGTTAGATGTTATTTTAAGGACAGGATTTTGTTCCTGACTGTGTCGCAGTCACCAAATGTGGAGAAGCTAAGGACGAAGATTTGGGGGTATATTATGGGCAATGAGAGGTTGGATGCGAATTATGTGGTTCCCCAATGGCAATGGATGCCACAGTTTGAGTGCAGAAGCGAAGCTCGAACTCTGATTGTTTTGGATGATGTGTGGACACTCTCCGTGGTGGATCAGCTTGTGTGTAGAATACCAGGTTGCAAGTTTCTTGTGGTGTCAAGGTCTAAATTCCAAACGGTGTTGAGTTATGAAGTGGAATTGCTGAGTGAAGAGGATGCCTTGTCTTTGTTCTGTCACCATGCTTTTGGACAGAGATCAATTCCTTTAGCTGCTAATGAGAATTTAGTCAAACAGGTTGTGACTGAGTGTGGAAGGCTTCCCTTGGCTCTTAAGGTGATCGGAGCTTCTTTGCGAGATCAAACTGAGATGTTTTGGATGAGTGTTAAAAACAGGCTATCTCAAGGCCAAAGCATTGGGGAATCCCATGAAATCAATCTGATTGAAAGAATGGCAATTAGTATCAATTACCTTCCAGAGAAGATCAAGGAGTGCTTCTTGGACCTGTGTTGTTTTCCTGAGGATAAGAAAATCCCTCTGGATGTTCTCATCAATATGTGGGTGGAAATCCACGATATTCCTGAAACAGAAGCTTATGTCATTGTGGTTGAGCTCTCCAACAAAAATCTTCTCACCTTAATGAAAGAGGCTCGTGCTGGAGGCCTGTATAGCAGTTGCTTTGAAATCTCAGTTACTCAACATGATGTACTGAGAGACCTAGCCATTAATTTGAGCAACCGTGAGAGCATTCATGAACGCCAGCGATTAGTTATGCCCAAACGAGAAAATGGAATGCCTAAAGAGTGGTTGAGATACAAGCACAAGCCATTTGAGGCTCAGATTGTTTCAATTCACACAGGTGAAATGAAGGAAGTGGACTGGTGTAATCTGGAATTTCCAAAGGCTGAAGTGCTGATCTTAAATTTCACATCCACTGAATACTTCTTGCCTCCTTTCATCAATAGAATGCCAAATTTGAGGGCATTGATAATTATTAACTACAGTGCAACATATGCTTGCCTTCTCAATGTTTCAGTTTTCAAGAACTTGTCCAACTTGAGGAGCCTGTGGCTTGAAAAAGTTTCCACCCCCGAGTTATCAAGCATTGTCTTGGAAAACTTAGGAAAATTATTTATTGTTCTGTGCAAGGTTAATAACAGTTTGGTGGAAAAAGAAGTAGACTTGGCTCAAGTCTTCCCTAATCTTTTAGAGCTCACTCTTGATCACTGTGATGATTTGATCCAACTGCCCTCAAGCATTTGTGGAATGAAGTCACTCCAAAACTTGAGTCTCACCAACTGCCACAATTTGACTCAATTGCCTGTTGAATTAGGCAAACTAAGATCTCTAGAGATCCTACGATTATATGCTTGTCCTGATCTGAAAACACTTCCTAATAGCATTAGTCACATGATAAGGTTGAAGTATATGGACATTTCTCAATGTGTTAACTTGACTTGCTTCCCTGAAGAGATTGGTAGTCTAGTAAGCTTGGAGAAGATTGACATGAGGGAATGCTCCATGATTAGAAATGTGCCAAAGTCTGCATTGTCGTTGCAATCTCTGAGGCTTGTGATTTGTGACGAGGAGGTATCTGGGATTTGGAAAGAGGTTGAGAAGGCCAAGCCTAATAATTTTCATATTCAAGTTTCAGAGCAGTACTTTGATTTGGACTGGCTCAAAGAGTGA 2463 0.4539 MALNDFFAGEIATELLKMLINISRKSLLCRGSADQLISYIQDLLPTIEEIKYSGVELPAQRQSQLDRLSEILRSGVELSHKVLASSRWNVYRNLHLAKKMDKLEKNVSKFLVGPMQAHIMADIHHTRFQMEERFDRVDNSVRRLEKYFGNMKIGVGGGGWVEEAVRSVDEDVVDSSSAVGLGFGKNKVREMVIGREDLWVVGISGIGGSGKTTLARELCKDNQVRCYFKDRILFLTVSQSPNVEKLRTKIWGYIMGNERLDANYVVPQWQWMPQFECRSEARTLIVLDDVWTLSVVDQLVCRIPGCKFLVVSRSKFQTVLSYEVELLSEEDALSLFCHHAFGQRSIPLAANENLVKQVVTECGRLPLALKVIGASLRDQTEMFWMSVKNRLSQGQSIGESHEINLIERMAISINYLPEKIKECFLDLCCFPEDKKIPLDVLINMWVEIHDIPETEAYVIVVELSNKNLLTLMKEARAGGLYSSCFEISVTQHDVLRDLAINLSNRESIHERQRLVMPKRENGMPKEWLRYKHKPFEAQIVSIHTGEMKEVDWCNLEFPKAEVLILNFTSTEYFLPPFINRMPNLRALIIINYSATYACLLNVSVFKNLSNLRSLWLEKVSTPELSSIVLENLGKLFIVLCKVNNSLVEKEVDLAQVFPNLLELTLDHCDDLIQLPSSICGMKSLQNLSLTNCHNLTQLPVELGKLRSLEILRLYACPDLKTLPNSISHMIRLKYMDISQCVNLTCFPEEIGSLVSLEKIDMRECSMIRNVPKSALSLQSLRLVICDEEVSGIWKEVEKAKPNNFHIQVSEQYFDLDWLKE* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2080 820 Gene3D - 326 408 IPR042197 -
Gso17g2080 820 Gene3D - 409 498 IPR036388 -
Gso17g2080 820 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Gso17g2080 820 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 817 IPR044974 GO:0006952
Gso17g2080 820 PRINTS Disease resistance protein signature 200 215 - -
Gso17g2080 820 PRINTS Disease resistance protein signature 277 291 - -
Gso17g2080 820 PRINTS Disease resistance protein signature 362 376 - -
Gso17g2080 820 PRINTS Disease resistance protein signature 679 695 - -
Gso17g2080 820 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 427 IPR027417 -
Gso17g2080 820 Gene3D Ribonuclease Inhibitor 503 803 IPR032675 -
Gso17g2080 820 SUPERFAMILY L domain-like 559 783 - -
Gso17g2080 820 Pfam NB-ARC domain 190 405 IPR002182 GO:0043531
Gso17g2080 820 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 135 IPR008808 -
Gso17g2080 820 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 3 817 - -
Gso17g2080 820 Gene3D - 174 322 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2080 Gso-Chr17 40446815 40450690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2080 673 796 Receptor kinase-like Gene Family AT5G27060 29.600 4.56e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g2080 - - gmx:100776117 1584.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0680 14 6833871 6837604 Gso17g2080 17 40446815 40450690 GST