Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2008 ATGGCTTCAGCGGAGCAGCCTCTGAAGAAGCGAAAGCTCTACGAGCCTTTACCAGAACCGCCACCGTTTTCGCCGCCGCAACCGCCGCCGCCGGAATCCGAAGCAACCCCTTCCTCTCCGCAAACCCTACCCACGCCGTCGTCCACTCCCCCGCTGTCTCAGGAGGAGATTCTCGCGAAGCGGCGGAACAAGGATGAAATTCGAAGCGTGTACGAAGGTTACAAGCGGATTAAGCGTTGCTTGCTTCGAAAAGACGCTCCCTCCTCCATGTCTGAACTCGAACAGAGTTATCTCGCTCTCATCACTTCTTCCAGAGGTTGTATGAGTGTACAAAGAATTGTGGCGGATCTTATTCCTCGGTACGCATGTCACTGTCCAACTGCTTTGGAAGCTGCAGCTAAAGTTGTTATTAATATGCACAACTTGAGTTTGGCCTTGATCAGCAGAGGAGAGGATTCCAGTGGTATTGCATTTGAAACTGCTAGAGCCTGTATTTGTGGCCTAGCTGATGTTTGCTGCGATGCTTCATCGGTGGCGCCTACATTAGCTGTAATTAGAGGAATTTGCGAAGCAGTTTTTCAGAATGTGCTCACCTTTTTTATAGCCTTATTCGAAGGGAAGGATGTCTTACAGATGGTTGACAAGAATTTCCTGAATATGCAAGATACTCCTGAGGCCTTTTCTGAGTTGAAACAAAAGATTTTAGATGAAGATGAATCTTCATTGACTAAACTGTCCAAGTTGCGCGTGTTATGTCTACTTCGGATATTCTTCTCTTGTCCAAAAGATTTGCTTGCAGCTTGTTTGGATCTCTTTGGCTCTGCCACAAAAGAGGCAACTAATGCCGAAGGACAGCGTTTTCTGAGCCTGGTGACTAGCACATTTGATGATGATAAGGCAGTTCACCTTTTCGAAAGAGCAATTGGTGGATCTAAATCATGTACAGATTCTACTGGGTCAGGCATCAGAGACAATGAGGCTGGTGAGGCAATTATGACTGAAGACAACCATGTTTCTGGTGGTGATTCATCTGTTGGCAAAAGCTGCTTGCTTATGCAGGTCCTTGACAAGGATCCCTTACTGCGGAAATGGATGTTGTGTAGATGTAAGAAGTTGCTTGACTTGCTCTCTGATGTATCACTGGAAATTACGTCAGTACTGCAAGGAATTCTTGGAATGTTTCCTCGACAAACAGATTTGGAGGACTGTCAAGCAGATAGTGATGAAGATAAATCTGATTCTTCAATTTACATGAATAGGAACTACATGGTTCCTAGGATCTCTGAGGAACATGAAAGCATTGGTGAATCATCTGGAAAAGGCAGCAGTTTGAGAGTTCATGTTGGTTCTTCTGATGGTTTTACTGATAAATATGTGATGGATCATAGCTCAGCAGTTCCTCTTGACCATGTTCCTGTGTTAAAAGTGGGTTCACATTACGATAATGGAGTCTCAAAGCCCATGAGCATTGGGGTGGGGGAGGAAGGGAATATGCCCACACCTAGGGACTCGGTAAGCCATCAAATGTTCTCACCTGCTGTTAGAACACCAGTAGACTTTAGGAGCAATTCATTTGAAGGTAGAAATGATTTCCTGAATGTAGAGAAAAATCATGTCTTAAATATGAACTTCAATTCACCTCCGCTGAGATCCTCTAGTGGATCTGTTAGTAATTCTTTGGCATCTCCTAATCATCATTTTATGTCACCAACTGCTTCAACAAAAGGTCAAATTGTCTGGTGCTGTGATGGGGATCCTGCAGCCATGGATATTGTCTCTGCTTCTAAGCAGTTATGGATAGGCTATGTAGGTCCTGATGTGCCTGAAAATCATATTAGGTTTCACTTAGAAAGATTTGGTACTATTGAACAATTTATTTTCTTCCCAGTAAAAGGATTTGCCTTGGTTGAGTACAGAAGGATCATTGACGCAATAAAAACTCGACACTGTTTACCTGGATGTTTTCCTTGCCGTGTAAAATTCATGGATATAGGACTTGGAACTAGGGGTGCAATGAATGGTGTTGCAGTTGGCTCTAGTTCTCATATTTATGTTGGAAATATTCCTAGTCAATGGGCCAGGGATGAGATCATGCATGAAACAAGGAAGGTGATCCACAAGGGTCCTCTTGCATTCATTGATCTTAGCTGTGAGTTTGCATTACTTATGGAATTTGAAACTCCTGAAGAAGCTGCAACTGTCATGTTGCATTTGAGACAACTACGAAGAGAAAGAAGTAACTACAACCAGCATTTTGGTCCAGGAACAGTTAATGTTGGAATTGGGCATGCTTATATGGATGGTGGAAGGCCTATACCTGCCCCTCCCCCTCCCCCTCCCCCTCCCAATCTTGACCTTAAAGTTAACAACCCTGCTGGATCACCTCATGCTCGAACTCTATCAGGGAGCCCCGCCGATAGCAGTCGAACAAGGATGTCTCACTTGTCTACCTTACTTGCTTCATTGCGCACAAAGTATAATATTAATCAAAACCTAGGTCTCAGTGATAATTATACGATTGGAAATAATTGTCCTCCCATGCGTGAAGAAGATATGGTGCCATCCAGCACTCTGTGCATAACTATTCCACGTAGTAGCTCTTTGTTCCTCACAGATGATGAGTTAATGGCCATTTGCAATCTTGCCATTGGAAACTCTGGATCAATTGTGCAGTTGACACAAACAAACTTGCAGATGGGATGTAGTTGGTTTGTCGAATGTAGTAATGTTGATGGTGCAGTTTCTGTTCTAAAGAATCTCCGTGGTTGTCCAGGATTGTTCTTCCAGATAGAATTCAGCAAACCCGGAAATCAGATTGCTGTACCATTTTCAGTTAAACCAGAGAACAATTCAATGGAGCTTGTATCCCCCAGAATAAATTCAGAAAATCATAATCTGCCTCAGTCAAACTGGCACTTTCCTGGTTCTAGGGAGATGTCAGAGCTTGGAGCAAGAAAACCTGATGGTTATGATAATTTGTCACAGGATCCTCATCAAGGAGGTATTGTTCCGCATTCACACTCTGGAGCACATGGACCTTCCATTCCACCACCACAACAAATTCAGTCTTCTCCTTTTGTTCGCCCTGTTTATGTTCCTCCTAATGGTCCATGGGATCGTCGGGGAATTAATAATCATTTACCTGTCAGCCAATTCAAGACAGGAGTAATGCCAAATAATTTTCATGGTAATGCTGTTGTCAGTCCTTTTATTCCTGCTTCAGTAACTCCACTTGCTCAGATACAAGGAACTCCAATGCATCCTTATAACCAGCAGGTGCCTCCATCAATTATACCACCACCTTTATCATCCTTGCCACCTCCTCAGCCTGAAATGCCACCTCCACTTCCTCCTTCTCCACCACCTTTACCCCAGGTTCAGCCACCCTTGGTCCCTCCACTGCCTAGTTCTCCTCCTCCCCCTCCTCCTCCACCACTGCCTGTTCAAGAAGCAGTCGATATGGAATGTTCAGGGCAGTCCTTGCTGTATCAATGGCAGGGGAATCTCTGTAAAAGTGGGGTTAATTACTGTACAATTTATGCATGCAAAGCAGATTCAAATATTTGTCGATATTCAAATGCCATACCTGAGCCTGCCGAGTGGCCCTCAAAATTAGACATGACAAAACGAACAGATCTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGAAGGGAAGTGTGCCGTTTGATTCCATCTTCCTCTAGTGACCACAAAAGGTTTCAGGATTTCATATCATACTTGAAGCAGAGGGATTGTGCTGGGGTTATTAAAATCCCAGCTTCAAAATCCATATGGGCAAGGTTGCTATTCATTCTCCCCCACTCACTTGAAACGTGCTCTTTGCTTTCTATTGCACATGATCCATCAGATTGCCTCATTGCTTTGGTTCTTCCCAAAGAAACAAACTTTGAGTGGATATGA 3933 0.4386 MASAEQPLKKRKLYEPLPEPPPFSPPQPPPPESEATPSSPQTLPTPSSTPPLSQEEILAKRRNKDEIRSVYEGYKRIKRCLLRKDAPSSMSELEQSYLALITSSRGCMSVQRIVADLIPRYACHCPTALEAAAKVVINMHNLSLALISRGEDSSGIAFETARACICGLADVCCDASSVAPTLAVIRGICEAVFQNVLTFFIALFEGKDVLQMVDKNFLNMQDTPEAFSELKQKILDEDESSLTKLSKLRVLCLLRIFFSCPKDLLAACLDLFGSATKEATNAEGQRFLSLVTSTFDDDKAVHLFERAIGGSKSCTDSTGSGIRDNEAGEAIMTEDNHVSGGDSSVGKSCLLMQVLDKDPLLRKWMLCRCKKLLDLLSDVSLEITSVLQGILGMFPRQTDLEDCQADSDEDKSDSSIYMNRNYMVPRISEEHESIGESSGKGSSLRVHVGSSDGFTDKYVMDHSSAVPLDHVPVLKVGSHYDNGVSKPMSIGVGEEGNMPTPRDSVSHQMFSPAVRTPVDFRSNSFEGRNDFLNVEKNHVLNMNFNSPPLRSSSGSVSNSLASPNHHFMSPTASTKGQIVWCCDGDPAAMDIVSASKQLWIGYVGPDVPENHIRFHLERFGTIEQFIFFPVKGFALVEYRRIIDAIKTRHCLPGCFPCRVKFMDIGLGTRGAMNGVAVGSSSHIYVGNIPSQWARDEIMHETRKVIHKGPLAFIDLSCEFALLMEFETPEEAATVMLHLRQLRRERSNYNQHFGPGTVNVGIGHAYMDGGRPIPAPPPPPPPPNLDLKVNNPAGSPHARTLSGSPADSSRTRMSHLSTLLASLRTKYNINQNLGLSDNYTIGNNCPPMREEDMVPSSTLCITIPRSSSLFLTDDELMAICNLAIGNSGSIVQLTQTNLQMGCSWFVECSNVDGAVSVLKNLRGCPGLFFQIEFSKPGNQIAVPFSVKPENNSMELVSPRINSENHNLPQSNWHFPGSREMSELGARKPDGYDNLSQDPHQGGIVPHSHSGAHGPSIPPPQQIQSSPFVRPVYVPPNGPWDRRGINNHLPVSQFKTGVMPNNFHGNAVVSPFIPASVTPLAQIQGTPMHPYNQQVPPSIIPPPLSSLPPPQPEMPPPLPPSPPPLPQVQPPLVPPLPSSPPPPPPPPLPVQEAVDMECSGQSLLYQWQGNLCKSGVNYCTIYACKADSNICRYSNAIPEPAEWPSKLDMTKRTDLRHVKSTFAATPSHRREVCRLIPSSSSDHKRFQDFISYLKQRDCAGVIKIPASKSIWARLLFILPHSLETCSLLSIAHDPSDCLIALVLPKETNFEWI* 1311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2008 1310 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 1 1309 - -
Gso17g2008 1310 MobiDBLite consensus disorder prediction 794 811 - -
Gso17g2008 1310 MobiDBLite consensus disorder prediction 1092 1146 - -
Gso17g2008 1310 SUPERFAMILY RNA-binding domain, RBD 585 655 IPR035979 GO:0003676
Gso17g2008 1310 MobiDBLite consensus disorder prediction 770 786 - -
Gso17g2008 1310 PANTHER NUCLEIC ACID BINDING PROTEIN 1 1309 - -
Gso17g2008 1310 Gene3D - 587 668 IPR012677 -
Gso17g2008 1310 MobiDBLite consensus disorder prediction 17 47 - -
Gso17g2008 1310 MobiDBLite consensus disorder prediction 1083 1146 - -
Gso17g2008 1310 MobiDBLite consensus disorder prediction 1 53 - -
Gso17g2008 1310 Pfam SPOC domain 1159 1301 IPR012921 -
Gso17g2008 1310 MobiDBLite consensus disorder prediction 982 1024 - -
Gso17g2008 1310 MobiDBLite consensus disorder prediction 767 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2008 Gso-Chr17 39428309 39439093 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g2008 K18667 - gmx:100780367 2073.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0759 14 7970653 7981486 Gso17g2008 17 39428309 39439093 GST