Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1941 ATGAAGGAAGAAAACCCATCAGAGAACAGGTCCAAAGCTTCAAAATTTTCAGACCAAAACCAAGCCCCAAAGCCTCAAAACACCAAAGGAGCCAACCTCAACAACAACAACAAAACAAGGTTGTGGGGTGCTCACATTGTGAAAGGCTTCTCCGCTGACAAAAAAACCAAGTCATTTGCCAGCAAAAAACTAACATCTTCAACAACAACAACAGCAATATCCGAGAATGTTGTTACAAACCAGAACAACAGCAATAAACCTTTTGTGCCTTCTTCTCATTCTCGAGTGAAAAGGTCCCTCATAGGTGACTTATCATGTTCAATAAACCCTGCTCAGGTTCATCCACACGCTTTCCCAACTCATAGAAGACAATCTTCAACCGATTTGTTCACTGAGTTGGATCACATGAGAGGATTGCTGCAAGAGTCAAAGGAGAGGGAAAGCAAGTTGCATGCTGAACTTTCCGAGTGCAGGAAGAAAATGACTGAGGTGGATGAGGTTGTGAAGAGGGTTGGTTTGTTGGAGCAAGAGAAGGCCACTCTCACCGAGCAATTGGGTGCTGCATTGAGTTGTGAGGAAGTGAAAGGGGAAGAAGAGCAGCACAAGGAGGTGAAGGTGCAGAATCTTGAGCTGGAGGTTGTGGAGCTGAGGAGGTTGAACAAGGAGCTGCAGATGCAGAAGAGGAACCTCTCTTGCAGGCTCTCTTCTCTTGAGGCTCAGCTGGCTTGTCCTAACAAATCTTCTGAGAGTGACGTTGTTGCCAAAATTAAAGCCGAGGCATCATTGCTGAGGCTCACGAATGAAGACCTGTGCAAACAAGTAGAAGGTTTGCAGATAAGCAGATTGAATGAGGTTGAGGAGCTTGCCTACTTGAGGTGGGTGAATTCATGTTTAAGAAACGAGTTGAAGAACACATGCTCAGCGTTGGATTCGGATAAGCCATCTAGTCCTCATTCAGTTGTGAGCAGTAGTGATGATTGTGTTAGTTCTTTCTCTGATCAAACCAATAGGTATTCAAATTGTGGAAGTGCAAATAGGTTCAATATGGTGAAGAAGCCAAAAAAGTGGCCTATAACTAGTGATGATTTATCACAAGTAGAGTGCCAAGGTAGTCTCATTGAGAAGAATAGGATTGAATCAGATGTAGGGGGAAGCCCTAGAAGAAGACACTCTATCAGTGGATCAAACTACTCAGAGGAAGAGGTTTCTTTGAGTAAGAGAAGACAGTCAGATTGTTTTGTGTGTTCAAAAGAAATGGAAAAGGAATCAGTGGCATTGTCTGTTCAACAATCTGGTTTGGAGATTGTCCAAAGACCACAATATTTTAGCAATTGCCAAGAAGCTAACAAGCTTTTGGTTTCTTCAGATGTCGAGAAAAGAGCCCTACGCATTCCTAATCCACCTCCAAGGCCTTCATGTTCTATATCTATCAAGACAAAACAAGAAACTTCAGCTCAAGTTCCACTGCCTCCACCTCCACCTCCTCCCCCACCTCCTATGAATTTTGCATCAAGAAGTAACATGGCATCGGTGAAACGAGCGCCACAAGTGGTGGAATTGTACCATTCACTTATGAAGAGAGACTCAAGAAAGGATTCTTCAAATGGAGGACTCTCTGATGCACCAGATGTTTCTGATGTTCGTAGCAGCATGATTGGAGAAATTGAGAACCGTTCATCGCATTTGCTTGCTATAAAGGCAGATATTGAAACTCAGGGAGAATTCGTGAATTCATTGATAAGAGAGGTGAACGATGCAGTTTATCAGAACATAGAAGATGTAGTGGCATTTGTGAAGTGGCTGGATGATGAACTTTGCTTCCTTGTGGATGAGAGGGCTGTCCTTAAGCATTTTGATTGGCCAGAAAAGAAAGCTGACACATTAAGAGAAGCAGCATTTGGCTATCAAGATTTGAAAAAATTAGAATCTGAAGTTTCCTCTTACAAGGATGATCCCAGGCTACCTGGTGACATTGCTCTAAAGAAAATGGTTGCATTGTCAGAAAAGATGGAGCGTACAGTTTATAACCTTCTTCGCACAAGAGATTCATTAATGCGTCATAGCAAGGAGTTTAAAATTCCAATAGAATGGATGCTTGACAATGGAATTATTGGCAAGATAAAGCTAAGCTCGGTTAAATTGGCTAAAAAGTATATGAAAAGGGTAGCTATGGAACTTCAAGTAAAGTCAGCATTAGAAAAAGATCCTGCAATGGATTACATGCTTCTCCAAGGAGTGAGATTTGCTTTTAGAATCCATCAGTTTGCAGGAGGGTTTGATGCAGAAACAATGCATGCATTCGAGGAGCTTCGCAATCTGGCCTCTCTTCTTAACAAAACATGA 2343 0.423 MKEENPSENRSKASKFSDQNQAPKPQNTKGANLNNNNKTRLWGAHIVKGFSADKKTKSFASKKLTSSTTTTAISENVVTNQNNSNKPFVPSSHSRVKRSLIGDLSCSINPAQVHPHAFPTHRRQSSTDLFTELDHMRGLLQESKERESKLHAELSECRKKMTEVDEVVKRVGLLEQEKATLTEQLGAALSCEEVKGEEEQHKEVKVQNLELEVVELRRLNKELQMQKRNLSCRLSSLEAQLACPNKSSESDVVAKIKAEASLLRLTNEDLCKQVEGLQISRLNEVEELAYLRWVNSCLRNELKNTCSALDSDKPSSPHSVVSSSDDCVSSFSDQTNRYSNCGSANRFNMVKKPKKWPITSDDLSQVECQGSLIEKNRIESDVGGSPRRRHSISGSNYSEEEVSLSKRRQSDCFVCSKEMEKESVALSVQQSGLEIVQRPQYFSNCQEANKLLVSSDVEKRALRIPNPPPRPSCSISIKTKQETSAQVPLPPPPPPPPPPMNFASRSNMASVKRAPQVVELYHSLMKRDSRKDSSNGGLSDAPDVSDVRSSMIGEIENRSSHLLAIKADIETQGEFVNSLIREVNDAVYQNIEDVVAFVKWLDDELCFLVDERAVLKHFDWPEKKADTLREAAFGYQDLKKLESEVSSYKDDPRLPGDIALKKMVALSEKMERTVYNLLRTRDSLMRHSKEFKIPIEWMLDNGIIGKIKLSSVKLAKKYMKRVAMELQVKSALEKDPAMDYMLLQGVRFAFRIHQFAGGFDAETMHAFEELRNLASLLNKT* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1941 780 Coils Coil 164 184 - -
Gso17g1941 780 MobiDBLite consensus disorder prediction 1 36 - -
Gso17g1941 780 MobiDBLite consensus disorder prediction 486 502 - -
Gso17g1941 780 Coils Coil 140 160 - -
Gso17g1941 780 Coils Coil 199 240 - -
Gso17g1941 780 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 780 IPR040265 -
Gso17g1941 780 MobiDBLite consensus disorder prediction 526 545 - -
Gso17g1941 780 MobiDBLite consensus disorder prediction 12 36 - -
Gso17g1941 780 MobiDBLite consensus disorder prediction 480 505 - -
Gso17g1941 780 PANTHER PROTEIN CHUP1, CHLOROPLASTIC-LIKE 1 780 - -
Gso17g1941 780 MobiDBLite consensus disorder prediction 379 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1941 Gso-Chr17 38579016 38583772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1941 - - gmx:100778600 1415.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0834 14 9157942 9163779 Gso17g1941 17 38579016 38583772 GST