Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1922 ATGAACAACGATTTCGTTTGGCTTCCTTCGCTGTATTCCGATCCGGAACTATTCACCTATCTGGAGCCATTCGTGTTCCGCAGTTCTCCGAGCTCGCATTTCCTGCAATCGATGGCGAACAATTCCAGAAGCTTCGCGCTCGAGGAGGCGTTCGGACACGTGTCGCGGTTCGCCGGCGCGTTGCTGTTCTGGCTCTCGCGCGCGTCGAGTTCCAATTTGGCGCGTTCGCTGCGCGGTTCTTCTCCGCCGCTTCGGTTCGGTAGCGTGCAGGTTAAGGCTGTGTCGACGAATGTGCGCGTGTTCGGGTTTCCGTTCGGATTGAAGAGGAAATCGTCGTTTGCGAGTGTGAGGTTGGGGAAGATTTCTAGTTTGGCGATGAGGATGATTTGGAGAGAAGCGAAGAGGCTTCGCTCGTTCCCTGTTCTGTCGCTGGCGGCTGCGTTGGTTCCACCGTTTCAAAACTTGTCATCAAATGTACTATCTAGCCCGTTGCAGAATCCTGATGTGCAAATGTTTGGAGCCATGGACCAAGTGCCTAAGGAGGTTGAATGCCAAGGATGTGCATTCCTACCGTGTCTTGAGTTGAACCAGGCAAAACCTGCAGTGGAGCCTAAGACTGGTATTGAATTTCCTTTGGTTCTAGACAATATATTCACTGGAGAGAAGAATTATGACTTCAACTCTGAGGTCCTGGTTGGAACAGGATCCAGAACCATGACAATTGTTAAAATCAAGTCACTGAAGGTCTATGCTTTTGGAGTTTATGTTCATCCATATTCCCTCTGTGAGAAATTGGGGCCGAAATATGCATCAATTTCTGCTGATGAATTGAATAACCATCATGACTTCTATAAGGATCTTCTCAGGGAGGATATTAATATGACTGTTAGACTTGTTGTAAATTGCAGGGGCATGAAAATTAACAGCGTGAAGGATGCTTTTGAAAAATCACTTCGAGCTCGATTAGTAAAGACAAATCCATCCACGGACTTTAGCTGCCTAAAGACATTTGGTTCATACTTCACAGAGAATTTCTCAATTCCTTTGGGAACGATAATTGAGTTCAAACGAACAGTTGATGGACGTCTGATCACTAAAATTAGTGGCAATCAGATAGGAAGTGTCCACTGCAAAGATTTGTGCCGGGCTTTCTTTGACATGTACATTGGAGATGTCCCTGTGTGTGAACAAACTAAAAAGGAGATTGGCATGAATGCTGCGAATATTATTAGGAAGTGCTAA 1242 0.4614 MNNDFVWLPSLYSDPELFTYLEPFVFRSSPSSHFLQSMANNSRSFALEEAFGHVSRFAGALLFWLSRASSSNLARSLRGSSPPLRFGSVQVKAVSTNVRVFGFPFGLKRKSSFASVRLGKISSLAMRMIWREAKRLRSFPVLSLAAALVPPFQNLSSNVLSSPLQNPDVQMFGAMDQVPKEVECQGCAFLPCLELNQAKPAVEPKTGIEFPLVLDNIFTGEKNYDFNSEVLVGTGSRTMTIVKIKSLKVYAFGVYVHPYSLCEKLGPKYASISADELNNHHDFYKDLLREDINMTVRLVVNCRGMKINSVKDAFEKSLRARLVKTNPSTDFSCLKTFGSYFTENFSIPLGTIIEFKRTVDGRLITKISGNQIGSVHCKDLCRAFFDMYIGDVPVCEQTKKEIGMNAANIIRKC* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1922 413 Pfam Chalcone isomerase like 230 402 IPR016087 GO:0016872
Gso17g1922 413 SUPERFAMILY Chalcone isomerase 203 410 IPR036298 GO:0016872
Gso17g1922 413 Gene3D - 260 402 IPR016089 -
Gso17g1922 413 Gene3D - 202 388 IPR016088 -
Gso17g1922 413 PANTHER FATTY-ACID-BINDING PROTEIN 2 38 413 - -
Gso17g1922 413 PANTHER FATTY-ACID-BINDING PROTEIN 2 38 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1922 Gso-Chr17 38277102 38282406 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1922 - - gmx:100803025 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0859 14 9627521 9634400 Gso17g1922 17 38277102 38282406 GST