Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1915 ATGATAGCGTACCTAGAACACTTTGTGCACGGAAATGACACAGAATCGATGCCAAACGACGACGTTTCAGCTCTCGATGGAGCTTTTCACTTCGGCGCCACCGCCGCCGCCGGCAAGGACTTCGGCGGGATGAAATCCGTTAAGCCGCGGGCGGTTATTCGCCCTGCCTTGGCCGGCGACGTGGAGAGGGCGGTGAAGGAGGCGGCGCGCACGACTTACCTGACTGTGGCGGCGCGCGGCAACGGCCACTCCATCAACGGCCAGGCCATGGCGGAGAAGGGCCTGGTCCTCGACATGCGCGCCATGGAGGACCACTTCACCCTCCTCTCTCTCGACGACGGGTCACTATACGTCGACGTTTCGGGAGGGGCATTATGGGAAGATGTCCTCAAACGCTGCGTTTCGGAGTTCCGCCTCGCGCCGCGGTCTTGGACCGATTACCTCGGCCTGACCGTCGGCGGGACGCTCTCCAATGCCGGCGTCAGCGGCCAGGCCTTCCGCTACGGCCCGCAAACCGCCAACGTAACGGAATTGGAGGTGGTGAGCGGCAAAGGCGAAACCTTAGTCTGTTCCGAATCACAAAATTCGGAACTCTTCTTCGCCACCCTGGGAGGATTAGGCCAGTTCGGCATCATAACTCGCGCTCGAGTCCCGGTTCAACAAGCCCCGGACATGGTGAGATGGATAAGGGTGGTGTACACAGAATTTGGCGACTTCACTCGAGACGCAGAGTGGCTGGTGACTCTCCGAGAGGGTGATGGTTTTGATTACGTGGAAGGTTTCGTTTTTGTCAACAGTGACGACCCTTGCAACGGCTGGATCACCGTCCCCGTGGGCCCCAACCAATACTTCGACCCGGTTCGGATTCCTTCAACCGCCGGCCCGGTTCTCTATTGCTTAGAACTTGCCCTTCATTATCGTAACCAAGACCATCCTTCCGCAGTTGATATGGAGGTGGATAGATTACTTGGACGGTTAAGATTCGTTGAGGGTCTAAAGTTCAGCGTGGATGTGACGTACATGGAATTCTTGCTACGTGTGAAGCGTGTGGAGGAGGATGCAAAAGCCAATGGAATCTGGGACGCACCCCACCCATGGCTGAATATGTTCGTCTCCAAGTCCAACATCGCTGAATTTGATCGTGAAGTGTTCAAGAAAATCCTCAAGCACGGAGTTGGTGGCCCCATTCTAGTGTACCCTCTTTTGCGAAGCAAGTGGGATAGTCGACACTCGGTAGTGGTGCCGGACAGCAACATTTTCTACATTATAGCCTTGCTCCGATTTATTCCACCACCCCCAAAGGGACCACCTACAGAACTATTGGTGGAACAAAACCATGAGATTATTCAGTTGTGCTACAACAGAGGCTTCGATTTCAAGTTGTATCTCCCTCACTACCAGTCAAAGGAGAACTGGATGCGACACTATGGAGATAAGTGGTCCAGATTCGTCGAGAGAAAGGCCAATTTTGATCCCTTGGCTATTCTTGCACCTGGACAGAAAATTTTTTCCCGAATCCCTCAACCCTTGTCTATCACTTAA 1542 0.5422 MIAYLEHFVHGNDTESMPNDDVSALDGAFHFGATAAAGKDFGGMKSVKPRAVIRPALAGDVERAVKEAARTTYLTVAARGNGHSINGQAMAEKGLVLDMRAMEDHFTLLSLDDGSLYVDVSGGALWEDVLKRCVSEFRLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTANVTELEVVSGKGETLVCSESQNSELFFATLGGLGQFGIITRARVPVQQAPDMVRWIRVVYTEFGDFTRDAEWLVTLREGDGFDYVEGFVFVNSDDPCNGWITVPVGPNQYFDPVRIPSTAGPVLYCLELALHYRNQDHPSAVDMEVDRLLGRLRFVEGLKFSVDVTYMEFLLRVKRVEEDAKANGIWDAPHPWLNMFVSKSNIAEFDREVFKKILKHGVGGPILVYPLLRSKWDSRHSVVVPDSNIFYIIALLRFIPPPPKGPPTELLVEQNHEIIQLCYNRGFDFKLYLPHYQSKENWMRHYGDKWSRFVERKANFDPLAILAPGQKIFSRIPQPLSIT* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1915 513 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 223 503 IPR015345 GO:0009690|GO:0019139|GO:0050660
Gso17g1915 513 Gene3D - 99 224 IPR016169 -
Gso17g1915 513 PANTHER CYTOKININ DEHYDROGENASE 7 32 508 - -
Gso17g1915 513 SUPERFAMILY FAD-binding/transporter-associated domain-like 33 219 IPR036318 GO:0050660
Gso17g1915 513 SUPERFAMILY FAD-linked oxidases, C-terminal domain 223 503 IPR016164 GO:0003824|GO:0050660
Gso17g1915 513 PANTHER GULONOLACTONE OXIDASE 32 508 - -
Gso17g1915 513 Pfam FAD binding domain 49 191 IPR006094 GO:0050660
Gso17g1915 513 Gene3D - 37 504 IPR016167 -
Gso17g1915 513 Gene3D - 226 462 IPR016170 -
Gso17g1915 513 ProSiteProfiles PCMH-type FAD-binding domain profile. 44 222 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1915 Gso-Chr17 38129967 38136418 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1915 K00279 - gmx:100816566 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0867 14 9875467 9881398 Gso17g1915 17 38129967 38136418 GST