Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1906 ATGGATTTCAGAGTGATGGGTTTGGAGTCTCCACTGTTCCACACGCTGCAACACATGATGGACATGTCAGAGGACGGTGCAGGAGACAACAAGACACACAATGCTCCAACATGGTCATACGTTCGAGACGCGAAAGCAATGGCTGCAACACCTGCGGATGTGAAGGAGTATCCGAATTCTTACGTGTTCGAGATCGACATGCCGGGTTTGAAATCTGGGGACATAAAGGTTCAAGTTGAAGACGACAACCTGCTTCTGATATGTGGGGAACGAAAGAGGGACGAAGAGAAAGAAGGGGCGAAGTATTTGAGAATGGAGAGAAGGGTTGGGAAGTTAATGCGCAAGTTTGTGCTGCCTGAGAATGCCAACACTGATGCAATCTCTGCTGTGTGCCAAGATGGTGTGCTTAGTGTAACCGTGCAGAAATTGCCTCCACCTGAGCCTAAGAAACCTAGGACTATTCAGGTTAAGGTTGCTTGA 480 0.4833 MDFRVMGLESPLFHTLQHMMDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKVA* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1906 159 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 8 158 - -
Gso17g1906 159 Gene3D - 5 158 IPR008978 -
Gso17g1906 159 SUPERFAMILY HSP20-like chaperones 29 151 IPR008978 -
Gso17g1906 159 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 43 157 IPR002068 -
Gso17g1906 159 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 8 158 - -
Gso17g1906 159 Pfam Hsp20/alpha crystallin family 53 157 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1906 Gso-Chr17 37976854 37977640 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1906 K13993 - gmx:100813195 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0874 14 10110769 10111549 Gso17g1906 17 37976854 37977640 GST