Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1896 ATGTTGGAAGTCAAATCAAATCTCCCATCTCATCAAAACCCAGTTCCCTCCCTTCCCCATGAAACAGAGCCAATGGGTGAGAACGATAACAAAACCAAAAAAAACCTCCTCTCCCTCCTAACAGAGCCAATCCAATGGATCCAAAGTCTCTCCTCACAGCTCAACCCAACCTTCGTAATCGGCGTATTCATAATCTACGGCATAGGCCAAGGCTTCTCCGGCTCGCTCTTCAAGGTAGTCTCAGACTACTACTGGAAAGACGTGCAGAAAATTCAACCCTCCACCGTTCAACTCTACGTCGGCTTTTACTTCATCCCGTGGGTTCTCAAACCTCTCTGGGGAATCCTCACCGACGCCTTCCCCGTCCGCGGCTACCGCCGCCGACCGTATTTTATTATCTCCGGCGTGATTGGCGCCATCTCCGCCGCGGTTGTCGCATTCGCCGGGAACCTCGCCGCCGTTGCCGCGCTGATGTGCTTCCTAGGCGTGTCGGCGTCGCTTGCCATCGCTGATGTTACGATTGACGCGTGCATTGCGAGGAACAGCATCGAGATGAGGAAGCTCGCGCCGGACCTGCAGAGCCTCTGTGGGTTCTGCTCCGGCGCCGGCGCGCTCGTCGGATACCTCGCCAGCGGGTTCTTCGTGCACCGTCTTGGAACTCAGGAGTCGTTGGGTCTTATGGCGCTTTCTCCGGCTTTGACAATTGTGCTGGGTTTTGTGATTTATGAGAACAGAACAAGTGCGTCGCATATTGAAAAGCAGATATCGCAGGCTGTGGAGAGTGTAGGAATGAAGATTAGAAGCATGTACCAAACAATGTTGTATCCTCATGTGTGGAAGCCTTCTCTTTACATGTTCCTTGCCCTGACTCTGAATGTAACCACTCACGAAGGACATTTTTACTGGTATACAGATCCAAAAGCCGGCCCTGCATTCTCTCAGGAGTTTGTAGGGGTGATCTATGCAATTGGTGCAGTGGCTTCATTAATAGGGGTTCTAATCTACCACAAGGCTCTAAAAGACTACCAATTTAGAGACCTAGTATTCTATGCACAACTCCTATATGGCATATCTGGTGTGTTGGACCTGATCTTCATCCTCCGTTGGAATTTGGTCATTGGAATCCCTGACTATTTCTTTGTTGTCCTTGAAGAAAGTGCTACAAGAATCACAAGCAAAATCAGGTGGATGCCCATGATGGTACTCAGCACCCAGTTGTGCCCTTTAGGCATTGAGGGAACCTTTTTTGCTCTGTTAATGTGCATTGATAGCATTGGTGCCCTTTTCTCCAAATGGGGTGGAGGGATGCTTCTTCGTGTCCTCCACATCACTAGAACTGACTTTACAAACCTTTGGCTGGCTGTTCTTATAAGGGACATGCTTAGGTTTGCTACACTTGCTTTGGTTTTTCTTGTCCCTAAGACAGATCAATATGAGGAACTGCTTCCTTCTGAGGTTTCAGGAAAGAACACGAGTGAAAAGGTACATGAAGAAGAGACTTTGGAGCTTGTCCCCATCCATGGCAAGACTGAAGTTTAG 1539 0.4912 MLEVKSNLPSHQNPVPSLPHETEPMGENDNKTKKNLLSLLTEPIQWIQSLSSQLNPTFVIGVFIIYGIGQGFSGSLFKVVSDYYWKDVQKIQPSTVQLYVGFYFIPWVLKPLWGILTDAFPVRGYRRRPYFIISGVIGAISAAVVAFAGNLAAVAALMCFLGVSASLAIADVTIDACIARNSIEMRKLAPDLQSLCGFCSGAGALVGYLASGFFVHRLGTQESLGLMALSPALTIVLGFVIYENRTSASHIEKQISQAVESVGMKIRSMYQTMLYPHVWKPSLYMFLALTLNVTTHEGHFYWYTDPKAGPAFSQEFVGVIYAIGAVASLIGVLIYHKALKDYQFRDLVFYAQLLYGISGVLDLIFILRWNLVIGIPDYFFVVLEESATRITSKIRWMPMMVLSTQLCPLGIEGTFFALLMCIDSIGALFSKWGGGMLLRVLHITRTDFTNLWLAVLIRDMLRFATLALVFLVPKTDQYEELLPSEVSGKNTSEKVHEEETLELVPIHGKTEV* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1896 512 CDD MFS_FBT 61 470 - -
Gso17g1896 512 Pfam BT1 family 278 478 IPR039309 -
Gso17g1896 512 Pfam BT1 family 70 246 IPR039309 -
Gso17g1896 512 SUPERFAMILY MFS general substrate transporter 60 473 IPR036259 -
Gso17g1896 512 Gene3D MFS general substrate transporter like domains 58 472 IPR036259 -
Gso17g1896 512 MobiDBLite consensus disorder prediction 1 27 - -
Gso17g1896 512 MobiDBLite consensus disorder prediction 1 17 - -
Gso17g1896 512 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 20 506 IPR039309 -
Gso17g1896 512 PANTHER FOLATE-BIOPTERIN TRANSPORTER 6-RELATED 20 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1896 Gso-Chr17 37876285 37883104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1896 - - gmx:100794191 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0885 14 10374654 10379098 Gso17g1896 17 37876285 37883104 GST