Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1878 ATGAATAACGGCGTTAGTCAAGAATCCGGTGTGCTCCTCGATTTGGCATCCCACGTGAACCGCTTCGCCTTCGATTCCTTCCGTTCCGACTACAACAACAGCAACACCCTTCTCTCCAATTTCTCGCAATTCAACAACACAAGAACCGGAGAAGCGGCAGTCAAACGCAGCGTTTCGCTGGGGCTGAAGGTTGGGGGAGCGAGTGTGCGGTTTAGGAACATTCTCAATGACTTCAACAGAGCCGTTAGGTTTCACTGCGAGAAGATCCCGATTGGGTTCGCCTCGCTTCGCGTCGGTGACGGTGACGGTGACGGTAACGGTGCTGATGGTAACGGGAATGGTGTTAGAGTGGATGAGTGTAGCGGTGTGGAGAATGAAGGGTTTAGAGGGAATGGCGTGGAGGGTGAGAAACCTAAAAAAGTTTTGATTTTGATGAGTGACACTGGTGGGGGGCATAGAGCTTCTGCTGAAGCTATCAAAGCTGCTTTCTATCAAGAATTTGGAGATGATTATCAGGTTTTCGTTACTGATTTGTGGGCTGATCACACACCTTGGCCATTCAACCAACTTCCCAGGAGCTATAGCTTTTTGGTGAAACATGGGCCATTGTGGAAGATGACCTACTATGGAACTGCCCCGCGTGTAGTGCATCAGTCTAATTTTGCTGCAACTGGAACTTTCATAGCTCGCGAGGTTGCTAAAGGCCTAATGAAATATCAGCCAGATATAATAATCAGTGTGCATCCACTGATGCAGCACGTTCCACTTCGAATTTTGAGGTCTAAGGGTCTTTTAAAGAAGATTGTTTTTACTACTGTTATTACAGATTTAAGCACATGCCATCCAACATGGTTTCATAAGCTTGTAACTAGATGCTATTGTCCTACAACAGATGTTGCGCAAAGGGCATTGAAAGCCGGACTGCAGCAATCCCAAATAAAGATTTTTGGTCTACCTGTCCGACCTTCCTTTGTTAAGCCTGTCCGGCCAAAGGATGAACTAAGGAGAGAATTAGGGATGGATGAGGATCTTCCTGCTGTATTATTGATGGGGGGAGGTGAAGGTATGGGGCCCATTGAGGCTACTGCTCGGGCACTTGGAGATTCATTATACGACGAGAATATTGGGGCTCCTGTAGGTCAGATCCTTGTGATCTGTGGTCGTAATAAGAAACTTGCTAACAAACTAAGTTCTATTAGTTGGAAGGTTCCTGTGCAGGTCAAAGGATTTGTTACCAAAATGGAGGAATGCATGGGAGCTTGTGATTGCATAATTACAAAGGCAGGCCCAGGGACGATTGCAGAGGCCCAGATCCGAGGCCTCCCTATTATTCTGAATGATTACATTGCTGGGCAGGAAGCTGGCAATGTCCCCTATGTAGTTGAAAATGGATGTGGGAAGTTTTCAAAATCCCCCAAGGAGATAGCGAAAATCGTAGCCGAGTGGTTTGGTCCAAAAGCTTACGAGCTACAACAAATGTCACAAAATGCATTGAGGCTAGCAAGGCCAGATGCTGTGTTCAAGATTGTACATGACCTTCACGAGCTTGTTAGACAAAGAAGCTACCTACCAGAGTATTCTTGTACAACTTAA 1593 0.4633 MNNGVSQESGVLLDLASHVNRFAFDSFRSDYNNSNTLLSNFSQFNNTRTGEAAVKRSVSLGLKVGGASVRFRNILNDFNRAVRFHCEKIPIGFASLRVGDGDGDGNGADGNGNGVRVDECSGVENEGFRGNGVEGEKPKKVLILMSDTGGGHRASAEAIKAAFYQEFGDDYQVFVTDLWADHTPWPFNQLPRSYSFLVKHGPLWKMTYYGTAPRVVHQSNFAATGTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRSKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTTDVAQRALKAGLQQSQIKIFGLPVRPSFVKPVRPKDELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGDSLYDENIGAPVGQILVICGRNKKLANKLSSISWKVPVQVKGFVTKMEECMGACDCIITKAGPGTIAEAQIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKSPKEIAKIVAEWFGPKAYELQQMSQNALRLARPDAVFKIVHDLHELVRQRSYLPEYSCTT* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1878 530 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 139 516 - -
Gso17g1878 530 Gene3D Glycogen Phosphorylase B; 330 501 - -
Gso17g1878 530 Pfam Glycosyltransferase family 28 C-terminal domain 380 466 IPR007235 GO:0016758
Gso17g1878 530 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 86 520 - -
Gso17g1878 530 CDD GT28_Beta-DGS-like 141 518 - -
Gso17g1878 530 Pfam Monogalactosyldiacylglycerol (MGDG) synthase 152 320 IPR009695 GO:0009247|GO:0016758
Gso17g1878 530 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 86 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1878 Gso-Chr17 37610734 37617470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1878 32 529 Glycosyltransferase AT4G31780 70.778 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1878 K03715 - gmx:100804814 1054.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0905 14 10992937 10998080 Gso17g1878 17 37610734 37617470 GST