Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1869 ATGGAACATAGTTTGAAAAGAAAGTCTCCAGAGAGTGGAGACAATTTACTCTTCAACAGATTTTCTCTGGATGACCTTAATGAAGATCTCTTGGAGAGGGTACTTTCATGGCTACCAACTTCCTCATTTTTTCGCCTCACTTCGGTGTGCAAGAGGTGGAAATCAGCTGCTGCTTCTGTGAGTTTCAAGCTTGCCTGCTCACACGTTCCTTCACGTGACCCTTGGTTTTTGATGGTTGCTCCAAACCTCAACCAATCTATTGTCTTCGACACTGCTGAAAACAGTTGGAAAAGACTCAATCACCTGCACCTTCCGCTCGAAGACTCTAACATCAGCTGCATGCCTGTTGCAGCCTCTGGTGGTCTGGTTTGCTACCGCAAACTGTTGGGAAACTTTGTTGTGTGCAATCCCGTTACCGGATCCTGTAGCGAACTCCCTCCATTGCATTTTGCCCTGGAAAACCAGTCTCTCAATGCGGTTGTGATGAGTACAACTTTCAATGATCAAATGTCCTATAAGATTGTGTTAGTCTTCGGTGAACTCCCTAACCTTTTGTTTAAAGTCTACAACTCTGGTTCTAGCTGTTGGGAAGATGAGGCTGCGCTGAGGAGGAATGTTGATGACAATTCCATGGATTGTGATTCAACCGATGATGACAATGTTGTGTACTTCCTTAGCAAGGCTGGAACTGTGGTGGTGAGTAGCATGCAGAGAAGCCCGTCTAAGCAGTATTCGTCGGTTATTACTAACAAAGACGGTCAGGAGATAGTGTATTTTCTCAGTTCTTCGGGGACGGTAGTAGCTTGCAATTTGACATCAAGGTGCTTCCTTGAGTACCCTAGGTTGCTGCCTGTTTTCAGTGAGTACTCCATTGATATCGTGGAGTGTGGTGGTGAGATGGTGGTTGTTTTGTTATCAGAATTCTTGGAAAGCACAAGTCTTAGGGTGTGGAAATACGACGAGGCCAATCGATGCTGGCAACAGATTGCTGCAATGCCTGCAGCAATGTCTCAAGAGTGGTATGGAAAGAAGGCAGATATTAACTGCGTTGGAGCCAGCGGTCGGATATTCATATGCTTGAACTCCCCTGAGCTATGTACTTATGTTCTGTGTGATTTGGTGACCAACAAATGGACCGAGTTGCCGAAATGTTGCTTGAATGGAGAAGTCATGGAATTCATGTCTGCCTTTTCATTTGAGCCAAGAATAGAGGCTTCTGTATGA 1224 0.4526 MEHSLKRKSPESGDNLLFNRFSLDDLNEDLLERVLSWLPTSSFFRLTSVCKRWKSAAASVSFKLACSHVPSRDPWFLMVAPNLNQSIVFDTAENSWKRLNHLHLPLEDSNISCMPVAASGGLVCYRKLLGNFVVCNPVTGSCSELPPLHFALENQSLNAVVMSTTFNDQMSYKIVLVFGELPNLLFKVYNSGSSCWEDEAALRRNVDDNSMDCDSTDDDNVVYFLSKAGTVVVSSMQRSPSKQYSSVITNKDGQEIVYFLSSSGTVVACNLTSRCFLEYPRLLPVFSEYSIDIVECGGEMVVVLLSEFLESTSLRVWKYDEANRCWQQIAAMPAAMSQEWYGKKADINCVGASGRIFICLNSPELCTYVLCDLVTNKWTELPKCCLNGEVMEFMSAFSFEPRIEASV* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1869 407 ProSiteProfiles F-box domain profile. 20 65 IPR001810 GO:0005515
Gso17g1869 407 Gene3D - 78 400 IPR015915 GO:0005515
Gso17g1869 407 SUPERFAMILY F-box domain 19 78 IPR036047 GO:0005515
Gso17g1869 407 Gene3D - 18 62 - -
Gso17g1869 407 PANTHER F-BOX/KELCH-REPEAT PROTEIN 18 407 - -
Gso17g1869 407 SUPERFAMILY Galactose oxidase, central domain 73 335 IPR011043 -
Gso17g1869 407 SMART fbox_2 26 66 IPR001810 GO:0005515
Gso17g1869 407 Pfam F-box domain 23 63 IPR001810 GO:0005515
Gso17g1869 407 PANTHER F-BOX PROTEIN FAMILY, ATFBX13-LIKE PROTEIN 18 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1869 Gso-Chr17 37440741 37443108 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1869 - - gmx:100801096 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0917 14 11270021 11272406 Gso17g1869 17 37440741 37443108 GST