Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1858 ATGAGCTTATCCAAGAAAGGTTCCCAAACAGACACAAAACTGAGCTCCTTAAACAAAGCAACCTATTTGAATCCAAATGCAGCAGAGTTTGTTCCATTTGCCCTCAGATCATCGCCATCTGGAAGCACCAGCTCGGTAGATGCAGCAGCGAGGTTTACTACTGCTGGATCTCTTGGGAAAGCAGTTTTAGATCGATCAGAATCATCCATTTCAAATAATTCCGATGATGAGGCTCACCAGTACTGGCGTTGTCAGCTTCCTGATGATATCACCCCTGACTTCAAGGTCATGGGAGAGGACGAATCCCAAGGTCTTAACAACCTCTCTTTAGCAGGCTTATCTATAAATGATGATAATGAATCCTCAATGTTTCCTTCTTCTAAGGGAAGTAGATATATACTAAATGAGCAGCTGGAACTGTCTCCACAGCACCTTAATGGCAATACTTTTGCTGATAAATTAAGGTTTTCCAATTCAACCTACAGGGAGGAGCCATCTTCAGGAAGCATTTTGAACTCATCAGCAAAGCCTTGGGATAGGCAAATTGGGAATACCGATTTGCACGTTACCAGTGGTCAAGAGGAACTTGTTTATGATGAAAACTCTGGACATGGATTCTTAAATGATGTTTTTGCAGGGAATTCTCTTGTGAATGATACAGATTTGAACCCTTTGGAGTTTTTAGCTTCTCTATTCCCTGGTTTTGCTTCAGAAAGCCTTGCTGAAGTTTTCTTCGCCAATGCATGCGATTTACATCTGACCATTGAGATGCTCACTCAGTTAGAGATTCAAGTTGATGGTGGCTTCAATCAGAATCCGAGTCCAAAGACTCTGTCATCTCCCAATCTGAGTGCAATGGACTTTCCAGCTCTTACATCATCAAATGGGCAGAATACTTCAAAATATGCTGCAGATAATGTTCAACAAAGTGGCATTCCATACATATCATCTGATAAAGACATGCTCATGTTCAAATCTGGCTCTTCTATTCCATCTAGAGGTTCTGTTGACTTTGCTTCAGCAGTCAGAAAATTGGCTTCTCAGGATTCTGGTATATGGAAGTATGATAAAAATGGTTCTGGTGATGCTTCCACTGGCTCTAGTAGGGGTTTAAATGCTCTGGCTAGTGCCTACAATGGTGGACAGGGGAGAGTCAACATTGGTGATAGATTACAGAGTCGTGGTTCTGCTCGGGCAGCTCCTGTTTGGCTTGAAACTGGTGACGCAGTTGCAAATATGTATTCTGAGCTGCGGGAGGAGGCTCGTGATCATGCACGCTTGCGTAATGCATATTTTGAGCAGGCACGACAAGCCTACCTTATTGGCAACAAGGCCCTTGCAAAGGAGCTAAGTGTTAAGGGGCAACTGCACAACATGCATATGAAAGCAGCTCATGGAAAAGCTCAAGAATCTATTTACCGCCAGAGGAATCCCGTTGCTCCAGAGAATGGAAGAGGGCACCAGAGAATGATAGACCTACACGGTCTGCACGTAAGTGAAGCGATTCACGTGCTGAAACACGAACTGAGTGTGCTAAGAAGCACGGCCAGAGCCGCTGAGCAGCGTTTGCAGGTTTACATCTGTGTTGGCACTGGTCACCATACTCGGGGCTCCCGCACTCCCGCAAGACTCCCGATAGCTGTACAGCGTTATCTACTTGAAGAAGAAGGCCTTGATTTCACGGAACCGCAGCCAGGCCTGCTTCGTGTTGTGATATATTGA 1722 0.4483 MSLSKKGSQTDTKLSSLNKATYLNPNAAEFVPFALRSSPSGSTSSVDAAARFTTAGSLGKAVLDRSESSISNNSDDEAHQYWRCQLPDDITPDFKVMGEDESQGLNNLSLAGLSINDDNESSMFPSSKGSRYILNEQLELSPQHLNGNTFADKLRFSNSTYREEPSSGSILNSSAKPWDRQIGNTDLHVTSGQEELVYDENSGHGFLNDVFAGNSLVNDTDLNPLEFLASLFPGFASESLAEVFFANACDLHLTIEMLTQLEIQVDGGFNQNPSPKTLSSPNLSAMDFPALTSSNGQNTSKYAADNVQQSGIPYISSDKDMLMFKSGSSIPSRGSVDFASAVRKLASQDSGIWKYDKNGSGDASTGSSRGLNALASAYNGGQGRVNIGDRLQSRGSARAAPVWLETGDAVANMYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKAAHGKAQESIYRQRNPVAPENGRGHQRMIDLHGLHVSEAIHVLKHELSVLRSTARAAEQRLQVYICVGTGHHTRGSRTPARLPIAVQRYLLEEEGLDFTEPQPGLLRVVIY* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1858 573 SMART SMR_2 488 573 IPR002625 -
Gso17g1858 573 Coils Coil 502 522 - -
Gso17g1858 573 CDD CUE_CID7_like 222 264 IPR041806 -
Gso17g1858 573 Pfam Domain of unknown function (DUF1771) 414 477 IPR013899 -
Gso17g1858 573 ProSiteProfiles Smr domain profile. 491 573 IPR002625 -
Gso17g1858 573 SUPERFAMILY SMR domain-like 489 571 IPR036063 -
Gso17g1858 573 Pfam Smr domain 491 559 IPR002625 -
Gso17g1858 573 Gene3D - 461 572 IPR036063 -
Gso17g1858 573 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 573 - -
Gso17g1858 573 SMART DUF1771_2 413 478 IPR013899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1858 Gso-Chr17 37333298 37338956 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1858 - - gmx:100796128 1124.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0923 14 11577488 11583419 Gso17g1858 17 37333298 37338956 GST