Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1855 ATGGCGACCTCCGTCGCAGTCGCCGGCGCTTTGACGGCGCATGATCGCCGGATTCTGACAGCGGTGAACGTCGGAGCGTCGAGCCTGTCGTTGGCCGGTTCCAGCTTCATTGTAGTGTGCTACCTCCTCTTCAAGGAGCTCCGCAAGTTCTCCTTCAAGCTCGTCTTCTACCTCGCTCTCTCTGATATGCTTTGCAGTTTCTTCGGCATAATAGGGGACCCGTCCAAAGGTTTCTTTTGTTATGCTCAGGGCTATAGCACACATTTCTTTTGTGTGGCATCTTTTCTATGGACTACAACAATTGCTTTTACCCTTCACCGCACTGTTGTAAAACATAAAACAGATGTTGAAGATTTGGAGGCCATGTTTCACTTGTATGTCTGGGGTACTTCCCTGGTTATGACAGTTATGCGCTCCTTTGGTAATGACCATAAACATTTTGGTGCATGGTGTTGGACACAAACAGGTCGCACAGGGAAGGCAGTTCATTTTGTAACATTTTACATGCCACTCTGGGGTGCAATTCTGTATAATGGATTTACATACTTACAAGTAATACGCATGCTGAATAATGCAACCCGTTTTCTTGGTAAATTTCAGATGGCGGTTGGTATGTCAGGCCAAACTTTTGTGTCAGATACAAGAGATAACATGAGGGCTTTGAATCGCTGGGGATACTATCCACTAATTCTGATAGGATCATGGACTTTTGGCACCATTAACCGTATTCATGATTTTTTTGAACCCAACCATAAGATCTTTTGGCTCACATTTCTTGATGTTGGAACGGCTGCTCTTATGGGCCTCTTTAACTCAATTGCTTATGGTCTCAATTCTTCTGTTCGTAGAGCAATTTGTGAAAGACTGGACAAGTTCTGGCCTGAGAGATTAAACAGATGGCTCCCTAACAGTTTAAAGTACAAGAACCTACAGCAAGAAAGTGAACTAGTTTTGTTCAAAACTGAAGATCAATAA 975 0.439 MATSVAVAGALTAHDRRILTAVNVGASSLSLAGSSFIVVCYLLFKELRKFSFKLVFYLALSDMLCSFFGIIGDPSKGFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLEAMFHLYVWGTSLVMTVMRSFGNDHKHFGAWCWTQTGRTGKAVHFVTFYMPLWGAILYNGFTYLQVIRMLNNATRFLGKFQMAVGMSGQTFVSDTRDNMRALNRWGYYPLILIGSWTFGTINRIHDFFEPNHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAICERLDKFWPERLNRWLPNSLKYKNLQQESELVLFKTEDQ* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1855 324 PANTHER G PROTEIN-COUPLED RECEPTOR 157-RELATED 10 311 - -
Gso17g1855 324 PRINTS Putative plant GPCR, GCR1, signature 19 34 IPR022340 -
Gso17g1855 324 PRINTS Putative plant GPCR, GCR1, signature 36 50 IPR022340 -
Gso17g1855 324 PRINTS Putative plant GPCR, GCR1, signature 52 74 IPR022340 -
Gso17g1855 324 PRINTS Putative plant GPCR, GCR1, signature 82 95 IPR022340 -
Gso17g1855 324 PRINTS Putative plant GPCR, GCR1, signature 97 115 IPR022340 -
Gso17g1855 324 PRINTS Putative plant GPCR, GCR1, signature 120 135 IPR022340 -
Gso17g1855 324 PRINTS Putative plant GPCR, GCR1, signature 159 171 IPR022340 -
Gso17g1855 324 PRINTS Putative plant GPCR, GCR1, signature 172 195 IPR022340 -
Gso17g1855 324 PRINTS Putative plant GPCR, GCR1, signature 221 242 IPR022340 -
Gso17g1855 324 PRINTS Putative plant GPCR, GCR1, signature 251 268 IPR022340 -
Gso17g1855 324 PRINTS Putative plant GPCR, GCR1, signature 269 285 IPR022340 -
Gso17g1855 324 SUPERFAMILY Family A G protein-coupled receptor-like 16 295 - -
Gso17g1855 324 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 19 279 IPR017981 GO:0004888|GO:0007166|GO:0016021
Gso17g1855 324 PRINTS GCR1-cAMP receptor family signature 30 48 IPR022343 -
Gso17g1855 324 PRINTS GCR1-cAMP receptor family signature 49 64 IPR022343 -
Gso17g1855 324 PRINTS GCR1-cAMP receptor family signature 80 98 IPR022343 -
Gso17g1855 324 PRINTS GCR1-cAMP receptor family signature 227 245 IPR022343 -
Gso17g1855 324 PRINTS GCR1-cAMP receptor family signature 259 278 IPR022343 -
Gso17g1855 324 PANTHER TRANSMEMBRANE PROTEIN 116 10 311 - -
Gso17g1855 324 Pfam Slime mold cyclic AMP receptor 17 278 - -
Gso17g1855 324 Gene3D - 11 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1855 Gso-Chr17 37296511 37303097 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1855 K22987 - gmx:100794547 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0928 14 11703643 11716094 Gso17g1855 17 37296511 37303097 GST