Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1829 ATGTTCTTCCTCTCTTCCCCCTTCTCTTCATGCTTCAGAGCTTCACAACGTACCAACCACGATCCCACAAACCTCACCACCTACATCTACCACACCGAATACGGCACCGTTTCACTGACATGGTCGCGCTCCCTGCTAGGCCGCTCCCTCCACGTGAACCTCCACAACCGTTCCTCCTTCCACCTCCTCCTCAAGCCATGGAAGAAAAACGGGTCCAAGAAGCTTTCTCACAATACGGTCTTCCTCTGGAACCTCTCCAACGCGAGGTTCGAGTCTGGACTCGAACCTCGCTCTAGATTCTACCTCGCCATCGAGGTAGAACATGGCCTCAGCCTACTCATTGGGGACTTATCCCCCAGGAGTAGTAAGGCCAAGAAGCCCAGCAAAACAAACCAATTACTCGTCCTGAAGCGGGACAACGTCCACGTGGCGCCACACCGCAGCCGGGTGTACCAAACCAAAGCGAAACTCGGAGGTAAGGTTAGGGAAATCGAAATAGATTGCGACGTTTACAACTGTGGCGGATACGGGTACGAGAACGAGAATAGTTCGAGGTTGTTGTTCAGTGTGGATGGAGAGAAGGTTCTTGAAGTGGCGAGGCTGAAGTGGAAGTTCAGAGGGAGCGAGCGTGTGGAGATCGACGGGGTGCACGTGCAGATCTCGTGGGACGTGCACGATTGGCTTTTTGAGAAGGATAAGGATATTGTTAATCATCGTAGTAGTAACAACAACAATAGTAATAATAATGGTATCGAGGGTCACGCGGTTTTCATGTTTAAGTTCGAGGAGGACGAGGTACGAGGTAGTGGTGGTGGGAAAGAGGAGGAGCAACAGTGGAGTATGGGGAGTGGTGGGGAGTGGAGGAATGGCAAGAGTTGGTCTTCTTCGTCTTTGTCGGTGTCTTCTACTTCTGGTGGATCTTTTGGGGGAAGTTCTTCGGTTATGGAATGGTCCAGTGTGGAGGAGAATGAGTTGGTGGTTCCTCTTGGGTTTTCTTTGGTGGTTTATGCTTGGAGAAGGTGA 1023 0.5132 MFFLSSPFSSCFRASQRTNHDPTNLTTYIYHTEYGTVSLTWSRSLLGRSLHVNLHNRSSFHLLLKPWKKNGSKKLSHNTVFLWNLSNARFESGLEPRSRFYLAIEVEHGLSLLIGDLSPRSSKAKKPSKTNQLLVLKRDNVHVAPHRSRVYQTKAKLGGKVREIEIDCDVYNCGGYGYENENSSRLLFSVDGEKVLEVARLKWKFRGSERVEIDGVHVQISWDVHDWLFEKDKDIVNHRSSNNNNSNNNGIEGHAVFMFKFEEDEVRGSGGGKEEEQQWSMGSGGEWRNGKSWSSSSLSVSSTSGGSFGGSSSVMEWSSVEENELVVPLGFSLVVYAWRR* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1829 340 Pfam Plant protein of unknown function (DUF868) 23 339 IPR008586 -
Gso17g1829 340 PANTHER OS08G0422401 PROTEIN 4 339 - -
Gso17g1829 340 MobiDBLite consensus disorder prediction 267 294 - -
Gso17g1829 340 PANTHER EXPRESSED PROTEIN 4 339 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1829 Gso-Chr17 36663200 36664868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1829 24 260 EF-hand Containing Proteins AT5G28150 32.677 4.02e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1829 - - gmx:100819926 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0966 14 13032937 13034929 Gso17g1829 17 36663200 36664868 GST
Gso17g1829 17 36663200 36664868 Gso4g0537 4 5176137 5177896 PCT
Gso17g1829 17 36663200 36664868 Gso6g0531 6 4911496 4913100 PCT
Gso4g0537 4 5176137 5177896 Gso17g1829 17 36663200 36664868 PCT
Gso6g0531 6 4911496 4913100 Gso17g1829 17 36663200 36664868 PCT