Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1827 ATGGCTTCTTCGTTTCTATCCGCAGCTTCGCACGCTGTCTCACCCTCTTGTTCTCTGTCCACCACGCACAAGGGAAAGCCCATGCTTGGAGGCAACACTTTGAGATTTCACAAAGGACCCAATTCCTTCTCTAGTTCAAGGTCTAGAGGTCGGATCTCTATGGCTGTTGCAGTTAATGTATCTCGGTTTGAAGGCATACCTATGGCTCCTCCTGATCCAATTCTCGGAGTTTCCGAGGCGTTTAAGGCAGACAATAGTGATGTCAAGCTCAATCTTGGAGTTGGGGCATACAGAACAGAAGAACTACAGCCATATGTGCTTAATGTTGTTAAGAAGGCAGAGAATCTTATGCTGGAGAGAGGGGATAACAAAGAGTATCTCCCAATTGAGGGTTTGGCAGCATTTAATAAGGCAACTGCAGAGTTGTTACTCGGAGCAGACAACCCAGCAATCAAACAGCAAAGAGTTGCCACTGTCCAAGGTCTTTCTGGAACTGGTTCTCTGCGACTAGGTGCAGCTCTGATAGAGCGATATTTTCCTGGGGCAAAAGTTTTGATATCAGCTCCTACCTGGGGTAATCACAAGAATATTTTCAATGATGCTAGTGTCCCATGGTCTGAGTACCGATATTATGATCCCAAGACAGTTGGGTTGGATTTTGAGGGCATGATTGAAGATATAAAGTCAGCTCCGGAAGGATCTTTTATCTTACTTCATGGATGTGCTCATAATCCTACTGGTATTGATCCAACACCTGAACAGTGGGAAAAAATAGCTGATTTAATTGAAGAAAAGAACCACATTCCCTTTTTTGATGTTGCTTACCAGGGGTTTGCTAGTGGAAGCCTTGATGAAGATGCAGCTTCTGTGAGACTGTTTGTGGCACGTGGCATCGAGGTTCTTGTAGCTCAATCTTACAGTAAAAATCTCGGTCTCTATGCTGAAAGGATTGGAGCAATCAATGTGATTTCATCGTCACCAGAATCTGCAGCAAGGGTAAAGAGCCAACTGAAAAGGATTGCCCGACCAATGTACTCTAATCCACCGGTACACGGGGCTAGGATAGTTGCCGATGTTGTTGGAAACCCAGTTCTCTTTAATGAATGGAAAGCAGAGATGGAAATGATGGCTGGAAGGATAAAGAATGTTAGACAGCAGCTATATGATAGTATTACTTCAAAAGACAAAAGTGGAAAGGATTGGTCATTCATACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAGAGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGGATTTCCCTGGCAGGATTGTCGTTGGCTAAATGCGAATACCTTGCGGATGCTATTATTGATTCATATCATAATGTCAGCTGA 1392 0.4375 MASSFLSAASHAVSPSCSLSTTHKGKPMLGGNTLRFHKGPNSFSSSRSRGRISMAVAVNVSRFEGIPMAPPDPILGVSEAFKADNSDVKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGDNKEYLPIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAALIERYFPGAKVLISAPTWGNHKNIFNDASVPWSEYRYYDPKTVGLDFEGMIEDIKSAPEGSFILLHGCAHNPTGIDPTPEQWEKIADLIEEKNHIPFFDVAYQGFASGSLDEDAASVRLFVARGIEVLVAQSYSKNLGLYAERIGAINVISSSPESAARVKSQLKRIARPMYSNPPVHGARIVADVVGNPVLFNEWKAEMEMMAGRIKNVRQQLYDSITSKDKSGKDWSFILKQIGMFSFTGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1827 463 Pfam Aminotransferase class I and II 89 455 IPR004839 GO:0009058|GO:0030170
Gso17g1827 463 Gene3D - 121 362 IPR015421 GO:0003824
Gso17g1827 463 PANTHER ASPARTATE AMINOTRANSFERASE 16 461 IPR000796 GO:0006520|GO:0008483
Gso17g1827 463 PRINTS Aspartate aminotransferase signature 236 255 IPR000796 GO:0006520|GO:0008483
Gso17g1827 463 PRINTS Aspartate aminotransferase signature 267 279 IPR000796 GO:0006520|GO:0008483
Gso17g1827 463 PRINTS Aspartate aminotransferase signature 335 360 IPR000796 GO:0006520|GO:0008483
Gso17g1827 463 PRINTS Aspartate aminotransferase signature 404 422 IPR000796 GO:0006520|GO:0008483
Gso17g1827 463 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 305 318 IPR004838 GO:0003824|GO:0009058|GO:0030170
Gso17g1827 463 MobiDBLite consensus disorder prediction 15 47 - -
Gso17g1827 463 Gene3D Aspartate Aminotransferase, domain 1 66 455 IPR015422 GO:0003824
Gso17g1827 463 CDD AAT_like 90 455 - -
Gso17g1827 463 SUPERFAMILY PLP-dependent transferases 61 457 IPR015424 -
Gso17g1827 463 PANTHER ASPARTATE AMINOTRANSFERASE, CYTOPLASMIC 16 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1827 Gso-Chr17 36528091 36539228 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1827 K00811 - gmx:547792 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0969 14 13219838 13225047 Gso17g1827 17 36528091 36539228 GST