Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1824 ATGGAGCCGGAAGTGAGCATCGAGGGATCGGCGATGATCCAGGTGGCGGTGGTTCCAATCGGAGCGGTGCCGGCGAACGTGCTGCGGGACTACTACTCTATGCTGCTCCCGCTGCACACGATCCCGCTCTCCGCGATCAGCTCCTTCTACACCGAGCACCAGAAGTCCCCCTTCGCCGTCCAGCCCTGGGACTCCGGCTCCCTCCGCTTCAAGTTCGTCCTCGGTGGCGCGCCGCCGAGTCCATGGGAGGACTTCCAGTCGCACCGCAAAACCCTCGCCATCGTCGGCGTCGTCCACTGCCCCTCCTCCCCCGATCTCGAAGCCGTCGTCGACGTCTTCGCCAGTGCCTGCAAGTCCTTCCCTTCCTCCCTCGTCGATCGCTGTTTCGCCTTCTGCCCAAACGATACGCAGCTTGAGGATGGAAGTAAGAAAGGTGGGAATTTGAGGTTGTTTCCTCCTGCGGATCGTCCGACTTTGGAGTTCCACTTGAATACTATGATGCAAGAGATCGCTGCGTCGCTGCTTATGGAGTTTGAGAAATGGGTACTTCAAGCAGAATCTTCTGGAACCATTCTCAAGACGCCTTTAGATTCTCAAGCTAGTCTCAGCTCAGAGGAGGTTATCAAGGCCAAAAAGAGAAGGCTTGGGCGTGCCCAGAAGACCATTGGTGATTACTGTTTGCTGGCTGGGTCCCCCGTTGATGCCAATGCTCATTATTCTACTGCATTGGAACTTTCGAGGTTAACTGGTGATTACTTCTGGTATGCTGGAGCATTGGAGGGTAGTGTTTGTGCCTTGCTGATTGACCGTATGGGCCAGAAAGATTCAGTCCTGGAAGACGAAGTTAGATATCGTTATAATAGTGTCATCTTGAATTACAAGAAGTCACAAGATAATGCTCAGCGAGTTTCTCCCCTAACTTTTGAACTTGAAGCTACTTTGAAATTAGCAAGGTTTCTTTGCAGGAGAGAGCTGGCCAAGGAGGTGGTGGAGTTGTTGACCACTGCTGCAGATGGTGCTAAATCTTTAATCGATGCAAGTGATAAGCTCATATTATATATTGAAATAGCTCGTCTGTATGGAAGTCTTGGATACCAAAGAAAAGCTGCATTCTTCTCAAGGCAGGTTGCACAGTTATATCTGCAGCAAGAAAATAGACTGGCTGCAATTAGTGCTATGCAAGTTTTGGCAATGACCACAAAAGCTTATCATGTTCAAAGTAGATCATCAATCTCTGATCATTCTTTGCACAGTAAGGGAATTGTATCAAATAATGCTGATAGTGGGAAAACATATCACCAATCAGCAGTCTCACTATTTGAGTCTCAATGGAGTACCCTCCAGATGGTTGTGTTAAGAGAAATTCTGCTCTCTGCTGTCCGTGCTGGTGATCCTCTTACTGCATGGAGTGCAGCAGCACGACTTCTTAGGTCCTACTATCCTCTAATAACACCTGCTGGGCAAAATGGCCTTGCTAATGCACTTTCAAATTCAGCTGAGAGGCTGCCACCAGGGACTCGTTGTGCTGATCCTGCTTTACCCTTTGTGAGGCTGCATTCCTTTCCTCTCCACCCAACACAAATGGACATAATAAAGCGTAGTACTGCTAGAGAAGACTGGTGGGCGGGTGCTGCTCCTTCAGGCCCTTTCATTTATACACCATTCAGTAAAGGAGAGCCTAATAATATCAAGAAGCAAGAGCTTATTTGGATTGTTGGAGAGCCTGTTGAGGTCTTGGTGGAATTGGCAAACCCATGTGGCTTTGATTTAAGGGTTGATAGCATCTATCTATCTGTGCATTCTGGAAATTTTGATGCCTTCCCTGTGAGTGTAAGCCTTCTACCAAATTCTTCAAAAGTGATCTCCTTATCTGGCATTCCAACATCAGTGGGGCCAGTTTCAATTCCTGGGTGCATTGCTCATTGTTTTGGTGTTATTACTGAACATCTGTTTAAAGAGGTTGACAATCTGCTTCTTGGGGCCTCACAAGGGCTGGTCCTTTCTGACCCTTTTCGATGCTGTGGATCTCCTAAGCTTAAGAATGTGCCTGTTCCTAGTATTTCTGTAGTACCACCACTTCCATTGTTGATATCACATGTTGTTGGAGGTGATGGTGCCATCATTTTGTATGAAGGCGAAATTCGTGATGTGTGGATACGCCTGGCTAATGCAGGTACTGTTCCAATTGAGCAGGCCCATATTTCCCTGTCAGGGAAAAACCAAGATTCTGTAATTTCATATTCTTCTGAGACTTTAAAATCTTGCCTCCCTTTAAGGCCTGGAGCAGAAGTTACATTCCCTGTGACCTTGAGAGCCTGGCAGGTTGGCTTGGTGGATGCTGATGCTGGTGCAGGGAAGACTGTCTCTGGGAACAATATGAGGCATTCCAAAGATGGAAGCAGCCCATCACTGTTGATCCACTATGCTGGTCCAATGAAAACCTCTGAAGATACTCCAACAAATGGATCTACTGTGCCCCCTGGCAGACGCCTTGTTGTTCCACTGCAGATTTGTGTTTTGCAGGGTTTGTCTTTTGTGAAGGCTCAGCTTCTTTCAATGGAGTTTCCTGCTCATGTCGGTGAAACTCTTCCGAAGTTGGATGACTTAAATAACAAGTCTACTGATGTTGAATCAGAAACAAAAATGGACAGATTGGTGAAAATAGATCCTTTCAGAGGAAGTTGGGGACTGCGATTCCTTGAACTTGAGTTATCTAATCCAACTGATGTCGTGTTTGAAATCAATGTCTCTGTCAAACTGGAGAACTCTAGCAACGAGGACAATCATTTTGCTGATCAGGGTGCTACAGAATATGTCTATCCTAAAACAAGAATTGATAGAGATTGCTCAGCCAGGGTTCTAGTGCCTCTTGAGCATTTTAAATTACCTGTTCTTGATGACTCCTTTTTTATGAAGGACTCACAAGCAGATGGGAATGGCGGAGGAAGAAATGCATCCTTTTCTGAAAAGAACACCAAAGCTGAACTCAATGCTTGTATCAAGAACCTTATATCCAGGATTAAGGTTCAATGGCATTCAGGACGGAATAGCTCTGGAGAGTTAAATATCAAGGAAGCTATCCTGGCAGCTCTCCAAACTTCGGTCATGGATGTTTTACTGCCGGATCCATTGACATTTGGCTTCAGGCTTGTTAGAGATGGTTCTGAATCAGGAAAACCTTATTCTGATAAAGATTCTGAATTAGTTGAATCTCCTGCTTCCAAAGGTTCTGTGATTGCACATGAAATGACACCAATGGAAGTTCTGGTTCGCAATAACACCAAGGATATGATCAAAATGAGTCTTAATATTACATGCAGAGATGTAGCTGGGGAAAATTGTGTAGATGGTACCAAAGCAACTGTTCTATGGACTGGTGTTCTGAGTGATATTACTATGGAAATTCCCCCACTTCAACAAATTAAACACTCTTTCTGCCTACATTTTCTTGTCCCCGGAGAGTATACATTACTTGCTGCAGCAGTGATTGATGATGCAAATGACATTCTTCGAGCTCGTGCAAAGACCACTTCAGCTGCTGAGCCAATTTTCTGTCGTGGACCACCATATCATGTTCGTGTTCTTGGGACTGCCTGA 3597 0.4584 MEPEVSIEGSAMIQVAVVPIGAVPANVLRDYYSMLLPLHTIPLSAISSFYTEHQKSPFAVQPWDSGSLRFKFVLGGAPPSPWEDFQSHRKTLAIVGVVHCPSSPDLEAVVDVFASACKSFPSSLVDRCFAFCPNDTQLEDGSKKGGNLRLFPPADRPTLEFHLNTMMQEIAASLLMEFEKWVLQAESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELSRLTGDYFWYAGALEGSVCALLIDRMGQKDSVLEDEVRYRYNSVILNYKKSQDNAQRVSPLTFELEATLKLARFLCRRELAKEVVELLTTAADGAKSLIDASDKLILYIEIARLYGSLGYQRKAAFFSRQVAQLYLQQENRLAAISAMQVLAMTTKAYHVQSRSSISDHSLHSKGIVSNNADSGKTYHQSAVSLFESQWSTLQMVVLREILLSAVRAGDPLTAWSAAARLLRSYYPLITPAGQNGLANALSNSAERLPPGTRCADPALPFVRLHSFPLHPTQMDIIKRSTAREDWWAGAAPSGPFIYTPFSKGEPNNIKKQELIWIVGEPVEVLVELANPCGFDLRVDSIYLSVHSGNFDAFPVSVSLLPNSSKVISLSGIPTSVGPVSIPGCIAHCFGVITEHLFKEVDNLLLGASQGLVLSDPFRCCGSPKLKNVPVPSISVVPPLPLLISHVVGGDGAIILYEGEIRDVWIRLANAGTVPIEQAHISLSGKNQDSVISYSSETLKSCLPLRPGAEVTFPVTLRAWQVGLVDADAGAGKTVSGNNMRHSKDGSSPSLLIHYAGPMKTSEDTPTNGSTVPPGRRLVVPLQICVLQGLSFVKAQLLSMEFPAHVGETLPKLDDLNNKSTDVESETKMDRLVKIDPFRGSWGLRFLELELSNPTDVVFEINVSVKLENSSNEDNHFADQGATEYVYPKTRIDRDCSARVLVPLEHFKLPVLDDSFFMKDSQADGNGGGRNASFSEKNTKAELNACIKNLISRIKVQWHSGRNSSGELNIKEAILAALQTSVMDVLLPDPLTFGFRLVRDGSESGKPYSDKDSELVESPASKGSVIAHEMTPMEVLVRNNTKDMIKMSLNITCRDVAGENCVDGTKATVLWTGVLSDITMEIPPLQQIKHSFCLHFLVPGEYTLLAAAVIDDANDILRARAKTTSAAEPIFCRGPPYHVRVLGTA* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1824 1198 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 272 IPR013935 -
Gso17g1824 1198 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 9 196 IPR013935 -
Gso17g1824 1198 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 742 IPR013935 -
Gso17g1824 1198 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1196 IPR013935 -
Gso17g1824 1198 PANTHER TRAPP II COMPLEX, TRS120-RELATED 1 1196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1824 Gso-Chr17 36493326 36502725 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1824 K20306 - gmx:100784850 2354.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0973 14 13292566 13319214 Gso17g1824 17 36493326 36502725 GST