Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1767 ATGGAGAGGATTCACGTCAGCGTTCGTGCAAAGCCTCTCTCCCAGGATGAGGCAAAAACCAGCCCCTGGAGAATCTCCGGCAACTCCATTTCCATTCCTAACCTCTCCAAGTTCGAATTCGATCAAATATTCAGCGAGAATTGTGCCACCGCGCAAGTCTTCGAAGCTCGCACCAAGGATATTGTGGAAGCCGCAGTTCGCGGATTCAACGGAACTGTTTTCGCTTACGGCCAAACTAATAGTGGGAAGACTTACACGATGCGAGGCACGAAAGCGGAGCCTGGAGTCATTCCTCTCGCCGTCCACGATTTGTTTCAAATTATTCAACAAGATGTGGATCGAGAATTTCTTCTTAGAATGTCATACATGGAGATTTATAATGAAGAGATAAATGATTTGTTGGCTCCTGAACATCGAAAACTGCAGATTCATGAAAATCTAGAGCGGGGGATATATGTTGCGGGGTTGCGAGAAGAAATTGTTGCCTCTCCTGAGCAAATCCTTGATCTCATGGAGTTTGGAGAATCTCATAGACATATTGGAGAGACAAATATGAATGTGTACAGTAGTAGGTCCCATACTATTTTCCGCATGATAATTGAGAGTAGGGATAGAAGTGAAGATGGAGGAAGTGGCAGCTCTTGTGATGCTGTCCGTGTATCGGTGTTGAATTTAGTGGATCTTGCTGGTTCAGAGCGTGCTGCAAAAACTGGAGCAGAAGGTGTCCGACTCAAAGAAGGTTCTCACATAAACAAGAGCTTAATGACTTTGGGAACTGTGATTAAAAAATTGAGTGAAGGTGCTGAGAGTCAAGGGAGTCATGTTCCATATCGAGATAGCAAGCTGACTCGAATTTTGCAACCTTCTCTCGGAGGAAATGCCAGAACAGCTATAATATGTAATATCACACTTGCACAGATACATACAGATGAAACTAAAAGCAGCCTTCAATTTGCAAGTAGAGCACTTCGTGTCACAAATTGTGCTCAAGTGAATGAGATTTTGACAGATGCTGCTTTATTAAAGCGCCAAAAGAAAGAGATTGAAGATCTTCGTGCCAAATTGATGGGTTCTCATTCAGAGCATTTGGAACAGGAGATTCTGAACCTTCGAAATACATTATTACAGACTGAACTGGAAAGGGAACGCATAGCTTTGGAATTAGAGGAGGAAAAGAAAGCTCAAGTTGAATGGGAAAAAAGAGTACAGGAACAAGCCAAGAAAATCGAAAATTTGAGTTCAATGGTTTTGTTTTCAAACAGGGATGAAAGTCGTGAGCATATTAAAAAGGACAAGAGGCGGGATACATGGTGTATAGGAAATCTTTCAGGGGAGCATCTCAGAAATGTATACCCTGGCATCCAACCTAGTGCTTCTACTATAAAACCCATAAGACCTAAACGAGACATGGGACCACTTCTTCCTTTTGAGGAACTTGTAAATGAAGATGTTTCTGTGGATGAGCCCTTCAAGCAAGAAGAAGATAATAAAGATGATACTAACAAGGATTGTAATCTACCAAACCCCTGTGCTTTATTGCATGTAACAAACAGGAAAAAGGCACCATCGCTGAAGAAAAGATTGTCCATGGAGGAGGACAACAAATTTCTAGAATTGCAGGCAGAATATGAGAGTTTGTTTCTAAAATTTGAAACTCAGAGAACTATAAGTGAGATACAGATTGAATCATTGAGAAAACAGCTAATTGAGGAAACTTCTCTTCAATGCCTTCATTCTAAGGAATCTATCGACTCTTTAAATTATGCTCATAGTGGTAGCTTGAATGCTGATAAAAATGTGAATTTTAGAGAGTCAGATGCTATTCTTGTTATCAAGAGACTTCAAGATCAGATTAAGGTTTTGGAAATGGAAAACTTGTCAAGCCAAAAAAGCTTGGATAATGTTGTTGGTCTGGCAACAAAGCAGAACATATGTGCTAGGGAGAAATATGAAGAGCTCTATGAAGAGCTTATAAGTGCACAGGAGACAGCTCGACTGGCTAATGAACAACTTACTTCCACTGAAACTGCGAGCAACATTAATGATGGAAATTTTGACTTTGTGATCAGTGTTTCCATGGGAATTGAAGAAATTGTGTCTGAAATTCAAAACTCAAAAGATGCTGTTCAAAGTGTTATGTTTATGGTGGATGACGCTATTACAAATTTCTCTGCTCTCTATGATATGCTCCTTGTTTTGAAAACCTCAGTATCTCAGGATTCTGCAGAACAAAGTTTAGTCTTGAGTAATTATCAGAAGTTGAATTCTTGCTTGAGAAAAAAAATATTTGAGCTTGAGAATGAAAAGATTCTTCTGGACAACCAATTGGCTGATCTTCAGAAGCATCTTCAGGAGTCAAAACTAGATTCTCAGAATTCCCAAAATTCTTTGATGGAAAACTTAGAACAGCATAAATTTGAAAATGCAGAGTTGATTTCTTATATTCAAACTCTTGAAAAGGATTTATCATGTTTGACATCGTCTTCAGTGACCAAGGATAGGGAAACTTTAAGAAAAGATCTGGAGAAGACAAAATCCAAGTTGAAAGAAACTGAGTCTAAGCTTAAGATTACCATACAAGAGAAAACAAAACTTGAGGGTGAGAAAGCCTATGCTGAACGAGAGATTAAACGGTTGCACGGTCAAAACTCTCTTCTTGAACGTGATATCAATAAACGTGATTCACTTGCAGGAAGAAGACGTGATTCAATTGTTGAAAGGGGTTCAAAGATGTTTGATCCTAAAAGACCAAAGGGTCTGGCAATTTCTCTGGAACAAACATTACAGGAAGAGCACAAAAAGCTGGAAGTTTTTGCATTTGAATCAGAAGCAAAAATTGCTTCGTTGGAAGAAAAAATTGCAGCTATGTTGATGGAGAAAGAAGAGGTGATATCTATTAATGAAGGTTTGATGTCAGAACTCGAAGGCTTGACTGAAAAACTGAATACATCAACCTCTGAACTATATAATTTGATGGAGGAAATTTCAGCTCTTAAACAAAGATTGGAAGAATCTGATATCAACCAAGAAAAATTGAAAAGCTCTGTTAAAGTACTGATGGAAGAAAAGGAGGAGTTGGCTATGCAACTCACTGATTCCCTTTTGGAAATAGAGGAGGAAAGGGCAATATGGTCTGCCAAAGAGAAAGATGCACTTCTAGCCATAGAAGAACAAGCAAAGTCAAACAATGTGCAAATTACATCATTATCAACAAAATTATTAGAAGTGAGGAATGAATTGGAATCTTGTAGAGAAGAATGCAAGACCCTACGTGAAAGATTGACTATTACATATGAAAATGCACATATCAAGGAAAATTCCAGGGAAAAGGTTTCAGAATTGGACCACCTGGAAAATCACCCTGAAACAACCAATGCTGAGAGCAAACAATCCCAAGAAATGTCAAAAGCCAATTCTGAGATGCAATCTTTGGAGCATGAGCTGCATGACAGTCCCAAGGAGGAGAAAGAAAATGAACTTCGGAAGGAAATACATGTTCTTGATAAAGGAGATAATCTATCAAGCCCGAACGTGTTTCAGAACCTCAAGGACAAACAATCTGTTGTGACAAAAGAAAGGGACAAATTGATGATTGAGATGGAAGATCAACATAAAAGAATGGAATTTCTGCAAAAGAATTGCCAGGATGAGTTATCGAAGGCCAAAGTCCATATTGAGGAGCTGAATTGGAAGCTTTCCGATATGGAGGCCAAAATGCCCGTGGGTGGCCTAAAAAACAACAAAGAGATGGCTAAGCTCAGAATGAGACTCCGTGGAACACAAGCAAAGCTGGATTCTTTCCGTTGTAGATACAAGGAAGCAATTGATGAATCAGTGTTAACGAATAAGAAGTATAAAGATCAGTTGGCTTCAAAAGGATTAGAAGTGCTTAACCTAATGAAACAGCTAGCTGCTGCCAAAGGCCAATAG 3930 0.3913 MERIHVSVRAKPLSQDEAKTSPWRISGNSISIPNLSKFEFDQIFSENCATAQVFEARTKDIVEAAVRGFNGTVFAYGQTNSGKTYTMRGTKAEPGVIPLAVHDLFQIIQQDVDREFLLRMSYMEIYNEEINDLLAPEHRKLQIHENLERGIYVAGLREEIVASPEQILDLMEFGESHRHIGETNMNVYSSRSHTIFRMIIESRDRSEDGGSGSSCDAVRVSVLNLVDLAGSERAAKTGAEGVRLKEGSHINKSLMTLGTVIKKLSEGAESQGSHVPYRDSKLTRILQPSLGGNARTAIICNITLAQIHTDETKSSLQFASRALRVTNCAQVNEILTDAALLKRQKKEIEDLRAKLMGSHSEHLEQEILNLRNTLLQTELERERIALELEEEKKAQVEWEKRVQEQAKKIENLSSMVLFSNRDESREHIKKDKRRDTWCIGNLSGEHLRNVYPGIQPSASTIKPIRPKRDMGPLLPFEELVNEDVSVDEPFKQEEDNKDDTNKDCNLPNPCALLHVTNRKKAPSLKKRLSMEEDNKFLELQAEYESLFLKFETQRTISEIQIESLRKQLIEETSLQCLHSKESIDSLNYAHSGSLNADKNVNFRESDAILVIKRLQDQIKVLEMENLSSQKSLDNVVGLATKQNICAREKYEELYEELISAQETARLANEQLTSTETASNINDGNFDFVISVSMGIEEIVSEIQNSKDAVQSVMFMVDDAITNFSALYDMLLVLKTSVSQDSAEQSLVLSNYQKLNSCLRKKIFELENEKILLDNQLADLQKHLQESKLDSQNSQNSLMENLEQHKFENAELISYIQTLEKDLSCLTSSSVTKDRETLRKDLEKTKSKLKETESKLKITIQEKTKLEGEKAYAEREIKRLHGQNSLLERDINKRDSLAGRRRDSIVERGSKMFDPKRPKGLAISLEQTLQEEHKKLEVFAFESEAKIASLEEKIAAMLMEKEEVISINEGLMSELEGLTEKLNTSTSELYNLMEEISALKQRLEESDINQEKLKSSVKVLMEEKEELAMQLTDSLLEIEEERAIWSAKEKDALLAIEEQAKSNNVQITSLSTKLLEVRNELESCREECKTLRERLTITYENAHIKENSREKVSELDHLENHPETTNAESKQSQEMSKANSEMQSLEHELHDSPKEEKENELRKEIHVLDKGDNLSSPNVFQNLKDKQSVVTKERDKLMIEMEDQHKRMEFLQKNCQDELSKAKVHIEELNWKLSDMEAKMPVGGLKNNKEMAKLRMRLRGTQAKLDSFRCRYKEAIDESVLTNKKYKDQLASKGLEVLNLMKQLAAAKGQ* 1310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1767 1309 Coils Coil 1066 1093 - -
Gso17g1767 1309 Coils Coil 331 408 - -
Gso17g1767 1309 Pfam Kinesin motor domain 35 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1767 1309 MobiDBLite consensus disorder prediction 1140 1158 - -
Gso17g1767 1309 ProSiteProfiles Kinesin motor domain profile. 3 325 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1767 1309 PRINTS Kinesin heavy chain signature 68 89 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1767 1309 PRINTS Kinesin heavy chain signature 183 200 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1767 1309 PRINTS Kinesin heavy chain signature 222 240 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1767 1309 PRINTS Kinesin heavy chain signature 275 296 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1767 1309 MobiDBLite consensus disorder prediction 1106 1123 - -
Gso17g1767 1309 Coils Coil 650 670 - -
Gso17g1767 1309 MobiDBLite consensus disorder prediction 1106 1158 - -
Gso17g1767 1309 MobiDBLite consensus disorder prediction 1124 1139 - -
Gso17g1767 1309 Coils Coil 1127 1147 - -
Gso17g1767 1309 PANTHER KINESIN-LIKE PROTEIN KIN-7O 1 1050 - -
Gso17g1767 1309 MobiDBLite consensus disorder prediction 1 20 - -
Gso17g1767 1309 Coils Coil 748 785 - -
Gso17g1767 1309 Gene3D Kinesin motor domain 1 356 IPR036961 -
Gso17g1767 1309 SMART kinesin_4 1 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1767 1309 Coils Coil 1193 1213 - -
Gso17g1767 1309 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 356 IPR027417 -
Gso17g1767 1309 Coils Coil 1218 1238 - -
Gso17g1767 1309 Coils Coil 967 1040 - -
Gso17g1767 1309 Coils Coil 611 631 - -
Gso17g1767 1309 Coils Coil 834 882 - -
Gso17g1767 1309 ProSitePatterns Kinesin motor domain signature. 221 232 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso17g1767 1309 CDD KISc_CENP_E 4 325 - -
Gso17g1767 1309 PANTHER CENTROMERE PROTEIN E 1 1050 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1767 Gso-Chr17 34453021 34492873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1767 2 434 Miscellaneous Gene Families AT5G06670 42.058 3.58e-97 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1767 K11498 - gmx:100813718 2463.34