Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1680 ATGGCAACAAAAGCAAAAGAAAGTTCTATTGTTGGGAAGGAGAAGAAGGCCCCATCATCAAATTCTCACACCACAACCACCAAAAGGACCACCAAACCATCCACAACAACAATAACTACAAACTCCACTAACAAGCCCGACTCAACCCCATATGAGAAAAACATCCCTAACTATCTCAAACCGGGAAAAACCTCACTCCCTGAGTCCCCCACTTCCAAACAACCAAAGAGTAACTCTCCCAACAATAAGACTTCTATGGCAATCAGAGGAAGATCTTGGGACAAACCATTTTCCTCTTTAAACTTGACAAGATCTTTAACAACTCCACGTACATCTTCCATTGGCCCAGCTAACAAAAGCACTATCCCTTCCATACCCATTTCAGATAGGACCTCAAAGGCCCCAAGTGATGGAAAAACCAAGCCATTAGTCACAAAGGGTACAAAGAAAACTATCCCTACTAATACTACTACTTCTACTAGCACTAAGAAGGTAGCTAATAAGGATCATGCTTCTATTAAGTCAACAAAGGGTACTCCTAAAGAGACTAAAAAAACTTTAAAGGTTGAAACTGAGCAAGTTAAGGAAGTCACAAAAGTTGAAGTGATAAAAGTGGAGAATGAAGAACACAAAGGACAAAAGGTTGAACATGTGAATGTTCATGTTTTTCCAAATGTTGAATATGAACATGAGATTGAGCATGTTCAAGGGCTTGAGAATTATGATCATCCACCCCATTATCAAGTTGATGATGAGAGGGTCATTTCTATAGTGCCAGAAGCTGAAAAAGAGTCACTAGAAGAGAAAGCAAAGGATAAGGAACATGAGTTAGAGGAAGATAAAACAAACCAAGATAAAGGAGGAAACAATAATGAGAGTGATCACCAAGAAAATCATGAAGGAAAATTTGTTGTTAATGATGAAGGTGAAGGTGAGGGTTGTGAAATTATAATAGAAGATCACAAAAGTGAGAACAAAAACAGTGAAGAAGCGGCAATAAAGGAACAAAAGGAAGCAGTTGATAAAGTAGAAGAGAACAAGGTTGAGGCAACGCCATTAAAACAACAATTAGGCGAAAGGAGACATGGGAAAATGGAGGCTCAGGTGTCCAATGATGAGATTGAAAAAACTGTTAAGCTTTTGGAGGAAAGGAAGAACAAGGTGAGGGCATTGGCTGGGGCATTCCAAACTGTCATTGATCATCAAACAACATCAAAATGA 1221 0.3907 MATKAKESSIVGKEKKAPSSNSHTTTTKRTTKPSTTTITTNSTNKPDSTPYEKNIPNYLKPGKTSLPESPTSKQPKSNSPNNKTSMAIRGRSWDKPFSSLNLTRSLTTPRTSSIGPANKSTIPSIPISDRTSKAPSDGKTKPLVTKGTKKTIPTNTTTSTSTKKVANKDHASIKSTKGTPKETKKTLKVETEQVKEVTKVEVIKVENEEHKGQKVEHVNVHVFPNVEYEHEIEHVQGLENYDHPPHYQVDDERVISIVPEAEKESLEEKAKDKEHELEEDKTNQDKGGNNNESDHQENHEGKFVVNDEGEGEGCEIIIEDHKSENKNSEEAAIKEQKEAVDKVEENKVEATPLKQQLGERRHGKMEAQVSNDEIEKTVKLLEERKNKVRALAGAFQTVIDHQTTSK* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1680 406 PANTHER CALMODULIN-BINDING PROTEIN-LIKE PROTEIN 1 403 - -
Gso17g1680 406 MobiDBLite consensus disorder prediction 14 51 - -
Gso17g1680 406 MobiDBLite consensus disorder prediction 259 347 - -
Gso17g1680 406 Coils Coil 263 283 - -
Gso17g1680 406 MobiDBLite consensus disorder prediction 64 88 - -
Gso17g1680 406 PANTHER EMB|CAB62594.1 1 403 - -
Gso17g1680 406 Coils Coil 364 391 - -
Gso17g1680 406 MobiDBLite consensus disorder prediction 1 184 - -
Gso17g1680 406 MobiDBLite consensus disorder prediction 147 166 - -
Gso17g1680 406 MobiDBLite consensus disorder prediction 96 133 - -
Gso17g1680 406 Pfam Plant calmodulin-binding domain 324 399 IPR012417 GO:0005516
Gso17g1680 406 Coils Coil 318 346 - -
Gso17g1680 406 MobiDBLite consensus disorder prediction 167 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1680 Gso-Chr17 31477318 31478597 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1680 - - gmx:102666755 677.552