Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1617 ATGTTCTCTCTCCAACAATTCCTTCCACACACTTCCTCTAAACTGCTTGACCATTCTCTTTCCTTAAAGCGCCACGGCCACCGCCGCTTCCACCGCCACTGCCCCACCACTCTCAGCAGTTCCCACCAATCCGGACCCTCGCTTTGTGATTCCAAAACTCAAGTGTCTCGTGTTCCGCTTTTGACTTCCACTCAGGCCTATGAAAAGCTAAAAACATTTAGAGAAAATATAAAGGGCAAGCAACAATTCCTTGCCATGTATTCTAGTATTTTTGGTGGGATAACAACAGACCCAGCTGCTATGGTTATTCCTATGGATGACCACATGGTCCACAGAGGCCACGGTGTCTTTGATACTGCAGCAATAATGGATGGATACCTATATGAGCTAGATCAACACCTTGATCGCTTTTTAAGGTCAGCATCCATGTCTAAAATAGATCCCCCATTTGATCGAGGAAGCATAAGAAGAATACTCATACAAACTGTAAGTGCTTCCAAGTGTAGAAAAGGATCACTAAGATATTGGCTCTCGGCAGGACCTGGCGACTTTCAGTTATCTCCCTCTTGTTGCCACCGATCAAGTCTGTATGCGATAGTAATACAGGATCTGTCACCATCCTCACCTAATTTCAGGGGCGTTAAAGTTGTCACTTCATCTATTCCCATTAAACACCCCAAGTTTGCTATCACTAAGAGTGTGAACTATCTTCCAAATGTGCTCTCAAAGGTGGAAGCTGAAGAAGCTGGTGCTTTTGTAGGCATTTGGCTTGATGGTGAAGGTTTTGTTGCTGAAGGGCCTAATATGAATGTGGCCTTTGTCACTAAAGATAAGGAACTTATAATGCCACACTTTGACAAAATTCTAAGTGGCTGCACAGCTAAGAGAGTTTTAACCCTTGCTGAGAGCTTGTTAAGGGAGGGTAAGCTTAAAGGGATAAGGGTGAAAACTGTGACTGTCGAGGAAGGTAAGCAAGCAGATGAAATGATGCTTCTTGGCAGCGGAGTTCTTGTTTGCCCTGTAGTGCAATGGGATGAGCAGGTTATTGGTGATGGCAAAGAAGGCCCTATAACGCAGGCTCTCTTAAATCTAATTGTTGAGGACATGAAATCAGGTCCCTCCACTGTTCGTATACCTGTTCCTTATTGA 1149 0.4439 MFSLQQFLPHTSSKLLDHSLSLKRHGHRRFHRHCPTTLSSSHQSGPSLCDSKTQVSRVPLLTSTQAYEKLKTFRENIKGKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHLDRFLRSASMSKIDPPFDRGSIRRILIQTVSASKCRKGSLRYWLSAGPGDFQLSPSCCHRSSLYAIVIQDLSPSSPNFRGVKVVTSSIPIKHPKFAITKSVNYLPNVLSKVEAEEAGAFVGIWLDGEGFVAEGPNMNVAFVTKDKELIMPHFDKILSGCTAKRVLTLAESLLREGKLKGIRVKTVTVEEGKQADEMMLLGSGVLVCPVVQWDEQVIGDGKEGPITQALLNLIVEDMKSGPSTVRIPVPY* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1617 382 Gene3D - 205 375 IPR043132 -
Gso17g1617 382 Gene3D - 62 202 IPR043131 -
Gso17g1617 382 PANTHER AMINO-ACID AMINOTRANSFERASE 57 381 - -
Gso17g1617 382 Pfam Amino-transferase class IV 115 343 IPR001544 GO:0003824
Gso17g1617 382 CDD PLPDE_IV 107 365 - -
Gso17g1617 382 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 91 370 IPR036038 GO:0003824
Gso17g1617 382 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 57 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1617 Gso-Chr17 27168892 27172792 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1617 K18482 - gmx:100794026 764.607