Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1613 ATGGCGCAGCAACTTGGAGTTCCATTTAAGTTATCATGCAAACCCTCTCACATTCACGCTCTTAAACCCTTTCACTCTCTCCCTCCCCTTCGCACCTTCACCACCAAACCTTCTCTTAATGCCAAATCCCATCATCATCATCATCCTTTATTAACGCTTCTTCGTTCCCACCGCACTCTCGCACCCTGCTGCAACTCCAACAAATCAGATATAATGTCACAATTGGAGCTTGGGAAACCGGAGCAAAAGGGGAAACCGGAGAAGCGAGTAAATGGTATATTCTGGATCATTCTCCTCAACATTGCCATATTCGTCGCTGACCACTTTTTTCGGGTTAATGGGATCAAGGCTTTATACTTGTACCACAATTGGCCTTCTTGGTACCAGTTTGTCACAGCTACATTTTGTCATGCTAATTGGAAGCATCTTTCTAGCAACCTTTTCTTCTTGTACATTTTTGGAAAGCTTGTTGAAGAAGAGGAAGGGAACTTTGCTTTGTGGCTTTCTTACATTCTTACTGGTGTAGGAGCCAACCTTGTTTCATGGTTGGTTTTACCAAGAAATACGGTTTCTGTTGGAGCTTCTGGTGCTGTTTTCGGGTTATTTTCTATCAGTGTCCTTGTAAAGATGTCCTGGGATTGGAGGAAGATCCTTGAAGTGCTTATATTGGGTCAGTTTGTTATAGAGAAGGTCATGGAAGCAGCCCAAGCTTCAACATCATTGTCAGGCCGAGGAGGCTACGCATTGCAAAGTGTAAATCACATTGCACATCTTTCTGGTGCTCTTGTTGGTGTGCTTTTGGTTTGGCTCCTTAGCAAAGTTCCTTCAGATCCTTCTGACCAATAA 846 0.4362 MAQQLGVPFKLSCKPSHIHALKPFHSLPPLRTFTTKPSLNAKSHHHHHPLLTLLRSHRTLAPCCNSNKSDIMSQLELGKPEQKGKPEKRVNGIFWIILLNIAIFVADHFFRVNGIKALYLYHNWPSWYQFVTATFCHANWKHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANLVSWLVLPRNTVSVGASGAVFGLFSISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTSLSGRGGYALQSVNHIAHLSGALVGVLLVWLLSKVPSDPSDQ* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1613 281 Pfam Rhomboid family 126 273 IPR022764 GO:0004252|GO:0016021
Gso17g1613 281 SUPERFAMILY Rhomboid-like 91 275 IPR035952 -
Gso17g1613 281 Gene3D - 87 276 IPR035952 -
Gso17g1613 281 PANTHER RHOMBOID-RELATED PROTEIN 30 280 - -
Gso17g1613 281 PANTHER RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED 30 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1613 Gso-Chr17 26838438 26841866 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1613 - - gmx:100781449 543.888