Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1607 ATGGAGTCTTCCGGTGCAGCGAATGAGAAGCTCTTAGAAAATGGCACTTCTTCTGATAAACCCACAAAGGGAAAGGGTGGTTTAAGAACCATGCCCTTCATCATAGTGAACGAGTGTCTGGAGAAGGTGGCGAGCTACGGGATCATGCCTAACATGATACTGTATCTGAGCAACGATTACGGCATGGCTATTGTGGAGGGCACAAAAGTAATTAACACTTGGTCTGCCATGTGCAGCGTTTTATCCTTATTCGGGGCCTTTCTCTCAGACTCTTACTTTGGTAGATTCATCGTCATTTGCATCGGTTCCTTCTCCAGCCTTCTTGGTTTAACCACTTTGTGGTTAACTGCAATGATCCCAGAGCTAAGACCTTCCTGTCAATCACTCATGCTAGGTTGCAACTCTGCTTCAGCTGCCCAACTAGCTGTGTTGTTCCTTTCCCTGGGATTAATTTCCATTGGAGCTGGTTGTGTTAGACCTTGTTCCATTGCATTTGGAGCAGATCAATTGACAATCAAAGTAAGGTCCAATGATGAGAGGCTCTTGGATAGCTACTTTAATTGGTATTATACCTCAGTTGGAGTATCAACTGTGTTTTCCATGAGTGTAATTGTGTACATTCAAGAAAATCTTGGATGGAAAATTGGGTTTGGAATACCTGCTGTGCTAATGTTGGTATCGGCTATCAGTTTCATTCTTGGTTCACCGTTCTATGCCAAAGTGAAGCCAAGTCACAGCTTACTCACTAGTTTTGCACAAGTAGTTGTGGTGGCTGTAAAGAACAGAAAACTTACTCTTCCTGATTGCAACTTTGATCAGTATTATCATGACCGTGATTCGGAGCTGATGGTCCCTACGGATAGCCTTAGGTGTTTGAACAAAGCTTGCATAATAAGAAATCCTGAGACAATCTCAAACCCTGATGGATCAGTTTCAGATCCATGGAGCCAATGCACAGTGGAACAGGTTGAGTCACTGAAATCTATGCTCAGAATCCTTCCTATGTGGTCCACTGGCATCTTTATGATTACTGCCTCCCAAACCTCATTCTCTATCATCCAAGCTAATACAATGGACCGAAGGTTATTTGGCAATTTCGAGATGCCTGCAGGATCCTTTAGTCTTATCAGTGTAATCACCCTAACAATAATCATTCCCACATATGAGCGCGTAATGGTACCTCTACTAGCAAAATACACAGGCTTGCCTAGAGGATTCAGTTGCAAAACTAGAATTGGGGTAGGATTTTTGTTTGTATGTGTAACTAAGGCAACATCAGCTATAGTTGAAACTATGAGACGAAATGCGGCCATTAAAGAAGGCTTTGAAGACCAACCTAATGCTGTAATTCAAATGTCAGTTTTATGGCTTGTTCCTGAGTTTTTTTTCCTTGGAATAGCTGAGGCTTTCAGCTCAGTTGGGCAGCTTGAGTTTTTCTACAGTTATATTCCCAAATCCATGTCTAGTTTTGCAATGGCTATTTTCACTCTTGAACTAGCTGCTGCTAATACAGTGGCAAGTGTGTTGGTGAGCATTGTGGACAAGGTCACTAGTGTAGGAGGGAACAAGAGCTGGCTATCAACTAACATTAATAGTGGACATCTGAATTACTATTATGCACTGCTCAGTTTCTTAAGTATAATTAACTACCTCTACTTTCTTGCTGTTTGTTGGGCTTATGGTCCTGCTCCGGGGCCAAATCTTGAAGCTTCTGCAGGCAAGGAAGAAGAGTAA 1734 0.4239 MESSGAANEKLLENGTSSDKPTKGKGGLRTMPFIIVNECLEKVASYGIMPNMILYLSNDYGMAIVEGTKVINTWSAMCSVLSLFGAFLSDSYFGRFIVICIGSFSSLLGLTTLWLTAMIPELRPSCQSLMLGCNSASAAQLAVLFLSLGLISIGAGCVRPCSIAFGADQLTIKVRSNDERLLDSYFNWYYTSVGVSTVFSMSVIVYIQENLGWKIGFGIPAVLMLVSAISFILGSPFYAKVKPSHSLLTSFAQVVVVAVKNRKLTLPDCNFDQYYHDRDSELMVPTDSLRCLNKACIIRNPETISNPDGSVSDPWSQCTVEQVESLKSMLRILPMWSTGIFMITASQTSFSIIQANTMDRRLFGNFEMPAGSFSLISVITLTIIIPTYERVMVPLLAKYTGLPRGFSCKTRIGVGFLFVCVTKATSAIVETMRRNAAIKEGFEDQPNAVIQMSVLWLVPEFFFLGIAEAFSSVGQLEFFYSYIPKSMSSFAMAIFTLELAAANTVASVLVSIVDKVTSVGGNKSWLSTNINSGHLNYYYALLSFLSIINYLYFLAVCWAYGPAPGPNLEASAGKEEE* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1607 577 MobiDBLite consensus disorder prediction 1 24 - -
Gso17g1607 577 Pfam POT family 97 526 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso17g1607 577 CDD MFS_NPF1_2 31 560 - -
Gso17g1607 577 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 18 565 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso17g1607 577 PANTHER PROTEIN NRT1/ PTR FAMILY 1.2 18 565 - -
Gso17g1607 577 MobiDBLite consensus disorder prediction 1 23 - -
Gso17g1607 577 Gene3D MFS general substrate transporter like domains 6 563 IPR036259 -
Gso17g1607 577 SUPERFAMILY MFS general substrate transporter 20 555 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1607 Gso-Chr17 26196335 26201318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1607 18 562 Organic Solute Cotransporters AT1G52190 49.458 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1607 K14638 - gmx:100783985 1129.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1095 14 20553485 20558668 Gso17g1607 17 26196335 26201318 GST