Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1049 ATGGACTTCGACTTCAGGACTAGTTTTCATTCTGTCAAGCACCTCTCTGCTGTGCAAGCGGCTAGACTTCACTCTGATAATAATTCAGTGATCCATTACACAGATGTAGATAATGATGGCCGATGTGATTTCCGATGTCCATTTTGTGATTTTGAAATTGAAGTTCCTGTGCTCTGCAGCAATTTCGAAGAGGAGCATTGCTCTGCCCTAAAAAATGTGGTTTGTCCCGTATGTGAAGAAAATATAGGGAAGGATGCAATCATGCAATTTACACATTCAAGCTCTCGAAGGTGGGCGTGGAAGCCTGAGAAATCTAGCATCTGGCCTGGTAACTCAGCAATGCTTGGCAAGAAGCTGGCCACCAGGGGAAACAAACAAGAATCAATAACTGATCCACTTTTGTCACCATTTATCTGCAACGTGCCTTTTCCAAAGTCTAACAATTTCCATCCAGATGAAAACTCCAGGTCCAACAATAAGGATATAGACATTCCTAATGCAAAAAGGACTAGCACAGATGCACCTGATAAAGGTGATGAGAAGGATCAACAAGAGAGAAGGCTGAAGGCAGCTTTTGTTCAACAGTTGGTATTGTCAACCATATTCGAGTAA 612 0.4232 MDFDFRTSFHSVKHLSAVQAARLHSDNNSVIHYTDVDNDGRCDFRCPFCDFEIEVPVLCSNFEEEHCSALKNVVCPVCEENIGKDAIMQFTHSSSRRWAWKPEKSSIWPGNSAMLGKKLATRGNKQESITDPLLSPFICNVPFPKSNNFHPDENSRSNNKDIDIPNAKRTSTDAPDKGDEKDQQERRLKAAFVQQLVLSTIFE* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1049 203 MobiDBLite consensus disorder prediction 154 187 - -
Gso17g1049 203 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 202 IPR033347 -
Gso17g1049 203 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 5 1 202 - -
Gso17g1049 203 Pfam Stress-induced protein Di19, C-terminal 123 201 IPR027935 -
Gso17g1049 203 MobiDBLite consensus disorder prediction 148 187 - -
Gso17g1049 203 Pfam Drought induced 19 protein (Di19), zinc-binding 43 92 IPR008598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1049 Gso-Chr17 9948714 9954033 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1049 - - gmx:100801801 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0352 5 3688674 3693668 Gso17g1049 17 9948714 9954033 GST
Gso17g1049 17 9948714 9954033 Gso4g1587 4 45492989 45497598 PCT
Gso17g1049 17 9948714 9954033 Gso6g1496 6 15062656 15067144 PCT
Gso4g1587 4 45492989 45497598 Gso17g1049 17 9948714 9954033 PCT
Gso6g1496 6 15062656 15067144 Gso17g1049 17 9948714 9954033 PCT