Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0887 ATGGTGTACTCCTACTACACCCCCACGTACTACTCAACCCTCCATGACTCACTCACCTCTCTGTGCAAGACCATTCTTCCTTTCAGCTTCAAGAAACGACCGTTACCTGCGGCGGAACACAAATTGTCGAAACTGCAATCCGACAACCTTAAATGGCAGCAAGACTCTTTCCACCAGGTGCTGAACTTGATGGGTCTCCACAAAGAAGGCATCGTCGCTGAATCTGAAGTTTCGGCCTTCAGAACCCACTTGCTAGACACCCTCATTGCTTCTCCTCCAGAACAAGAACACCCCGTTATATTAAGAGATAAGCTTCTGTTTCTCCAGGAACTTCTCTATGCCAAGTGCATTTCTGAAGAAGAGTACCATTCTTCTAAGAGGCCATTACTCCAGAGACTGGCAGCACAGGGGGCTCAGATTGAAGCTAGGGATGTGATCGTGGCAAGGCCTAAGGACTCAAAAGAGAATTCAGAGGAAGAGTGGTCAGTGATTGATTTGAAGGATGAGAAGTGCTGGGTGAACAAAGAGAATTTGGGTAGTAAGAGCAAGTCCAATCAGGGATCAGCCATGAAGCAGATTAAAGGAGCAGCCTTGGTATTTGGCTTTGGCAAAGGTGGGAAAAATGGGGAAGAAAAGAGCATGTTTGACTCACCTTCTTTGTCTGCCAACAATGAATCAAGGGAAAACCCCTTCTGGGATGCTCAGACAAAGGAAAAACAAAGTGAAGGAAAGTCAATTCTTATGGAGGAAAGTGTGCCTCCAGAACCAGTGAAGGAGAGTGGCGGTTTGGACAAGTTGAAGAGGAAACCATTTAGAACTTTGTTTCATAAGGAGCAAAGTGGTGGTCCTGAACAAGATCAAAGATCGGGGAAATCAGGTAAAAAGCAATGGGGATTTGAAGGGTTCAAGAAATGGAGGAGAAATGAATCAGAAGAAGAGACAGCTCCTTTGCCTCTTAATGAGAGTGAGGAGGCCTATTCGGGTTCCTTAGCAAAGACACTTGGGGAGGGACCAGACACTAAGTTAATAAAGAAGAAGTTGCATTCTGATGGTTCCCCATCTGATTTTTTTATTGATAAGGTTTTGGGAGACAAGATAAAGAAGGAGTTGTCAAGAATCCAGACAGAACTGAGCAGCACAAACCCAAATCTTAAATTTTCGAATGATCAGATTGAAGCAATTTCTACAAGAATTCCAGTGGACAAGGCTGAGTTGAAAAATTACTTTCCCAAATCATGGTGTGACCGATACGGTGATGTTGTGCTGGATGTGGTGAAGAAAGAGTTCAAGGACCATGTTGCGGAAATGGAGAACAGGCGCAACATTGCTAGAGAAAAACAAAGCAACTCTAGGCGTTGGACAACAACAACATTTGACGGTGACGAAAACATTCATCCAAATCTTTTTGGTCATCGTGATAATAATTCAGTTCGTAGCAGTAACATTAATCCATTTTCTCATGGTTACGCTTAG 1473 0.4386 MVYSYYTPTYYSTLHDSLTSLCKTILPFSFKKRPLPAAEHKLSKLQSDNLKWQQDSFHQVLNLMGLHKEGIVAESEVSAFRTHLLDTLIASPPEQEHPVILRDKLLFLQELLYAKCISEEEYHSSKRPLLQRLAAQGAQIEARDVIVARPKDSKENSEEEWSVIDLKDEKCWVNKENLGSKSKSNQGSAMKQIKGAALVFGFGKGGKNGEEKSMFDSPSLSANNESRENPFWDAQTKEKQSEGKSILMEESVPPEPVKESGGLDKLKRKPFRTLFHKEQSGGPEQDQRSGKSGKKQWGFEGFKKWRRNESEEETAPLPLNESEEAYSGSLAKTLGEGPDTKLIKKKLHSDGSPSDFFIDKVLGDKIKKELSRIQTELSSTNPNLKFSNDQIEAISTRIPVDKAELKNYFPKSWCDRYGDVVLDVVKKEFKDHVAEMENRRNIAREKQSNSRRWTTTTFDGDENIHPNLFGHRDNNSVRSSNINPFSHGYA* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0887 490 PANTHER OS09G0556800 PROTEIN 1 483 - -
Gso17g0887 490 MobiDBLite consensus disorder prediction 464 490 - -
Gso17g0887 490 Coils Coil 426 446 - -
Gso17g0887 490 MobiDBLite consensus disorder prediction 209 323 - -
Gso17g0887 490 MobiDBLite consensus disorder prediction 214 230 - -
Gso17g0887 490 MobiDBLite consensus disorder prediction 260 314 - -
Gso17g0887 490 MobiDBLite consensus disorder prediction 469 490 - -
Gso17g0887 490 MobiDBLite consensus disorder prediction 231 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0887 Gso-Chr17 8289220 8292069 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0887 - - gmx:100819771 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0887 17 8289220 8292069 Gso17g0887 17 8289220 8292069 ECH
Gso17g0887 17 8289220 8292069 Gso15g1667 15 25405359 25408532 PCT
Gso15g1667 15 25405359 25408532 Gso17g0887 17 8289220 8292069 PCT